Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 KIR2DS4-201ENST00000339924 1608 ntAPPRIS P5 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 HMGA1P1-201ENST00000415560 1062 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC244197.1-201ENST00000456494 951 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC093300.1-201ENST00000510368 1201 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 COQ10BP2-201ENST00000513804 724 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC132825.4-202ENST00000578792 434 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 AC006483.2-201ENST00000609813 515 ntBASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
SHANK2Q9UPX8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 PFN2-212ENST00000490975 858 ntTSL 4 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 FAM86B3P-203ENST00000523992 854 ntBASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
SHANK2Q9UPX8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 AL390755.1-201ENST00000623716 2027 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 NSMCE1-201ENST00000361439 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 HNRNPA1P58-201ENST00000403629 610 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 SERBP1P2-201ENST00000436888 1164 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 EEF1GP8-201ENST00000506566 1154 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 RN7SKP155-201ENST00000516031 288 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 PEBP1P2-201ENST00000603980 558 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 AC008972.2-201ENST00000606587 494 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 AL627230.2-201ENST00000613254 655 ntBASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SHANK2Q9UPX8 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 AC020910.6-201ENST00000623084 1459 ntBASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 GGTLC4P-201ENST00000402176 664 ntBASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 BATF-202ENST00000555504 361 ntTSL 2 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 AC055811.3-201ENST00000584952 686 ntBASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 ZNF436-AS1-201ENST00000335648 2547 ntBASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 MBP-202ENST00000355994 2772 ntTSL 5 BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SHANK2Q9UPX8 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms