Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC090505.1-201ENST00000430515 1834 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 COX5BP1-201ENST00000507622 393 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC106886.1-201ENST00000568660 600 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC002472.3-201ENST00000640124 621 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 KHSRPP1-201ENST00000427983 1768 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AC152010.1-201ENST00000415779 2006 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 DMBT1P1-203ENST00000636837 4628 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 AL023775.1-201ENST00000454907 1746 ntBASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
TTC9CQ8N5M4 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AL590440.2-201ENST00000641973 1595 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 GZMB-202ENST00000382540 816 ntTSL 5 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AL136309.1-201ENST00000403917 691 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 BOLA2P3-201ENST00000404566 256 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AP000812.2-201ENST00000538934 718 ntBASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
TTC9CQ8N5M4 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC11.62□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms