Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDKL3Q8IVW4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.08■□□□□ 0
CDKL3Q8IVW4 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.08■□□□□ 0
CDKL3Q8IVW4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC005840.4-201ENST00000541242 2494 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 TMEM14DP-201ENST00000422205 345 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 COX5BP1-201ENST00000507622 393 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC078819.1-201ENST00000547454 765 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC012085.1-201ENST00000548270 765 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AL596325.1-201ENST00000563991 1082 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 MIR4683-201ENST00000579659 81 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 RN7SL713P-201ENST00000582127 302 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 AC244669.2-201ENST00000612320 853 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CU639417.3-201ENST00000624240 1404 ntBASIC15.07■□□□□ 0
CDKL3Q8IVW4 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
CDKL3Q8IVW4 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CDKL3Q8IVW4 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CDKL3Q8IVW4 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.06■□□□□ 0
CDKL3Q8IVW4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms