Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC15.03■□□□□ -0
CASC4Q6P4E1 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC15.03■□□□□ -0
CASC4Q6P4E1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
CASC4Q6P4E1 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.03■□□□□ -0
CASC4Q6P4E1 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC15.02■□□□□ -0
CASC4Q6P4E1 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.02■□□□□ -0
CASC4Q6P4E1 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 MIR661-201ENST00000384842 89 ntBASIC15.02■□□□□ -0
CASC4Q6P4E1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.02■□□□□ -0
CASC4Q6P4E1 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
CASC4Q6P4E1 PIN1P1-201ENST00000412108 996 ntBASIC15.02■□□□□ -0
CASC4Q6P4E1 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.02■□□□□ -0
CASC4Q6P4E1 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 AC002472.2-201ENST00000442739 958 ntBASIC15.02■□□□□ -0
CASC4Q6P4E1 AC022137.2-201ENST00000503482 481 ntBASIC15.02■□□□□ -0
CASC4Q6P4E1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.02■□□□□ -0
CASC4Q6P4E1 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.02■□□□□ -0
CASC4Q6P4E1 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CASC4Q6P4E1 RN7SL832P-201ENST00000607781 1756 ntBASIC15.02□□□□□ -0.01
CASC4Q6P4E1 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
CASC4Q6P4E1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AL138725.1-201ENST00000407347 1314 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 BCRP1-201ENST00000444246 691 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AC131206.1-201ENST00000538078 1211 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AL096865.1-201ENST00000606796 927 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 BEND3P1-201ENST00000421591 1944 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AC011840.2-201ENST00000563063 1520 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AC090505.1-201ENST00000430515 1834 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CASC4Q6P4E1 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 AC011474.4-201ENST00000623523 2076 ntBASIC15.01□□□□□ -0.01
CASC4Q6P4E1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CASC4Q6P4E1 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CASC4Q6P4E1 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15□□□□□ -0.01
CASC4Q6P4E1 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms