Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.91□□□□□ -0.34
RAB3BP20337 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC12.91□□□□□ -0.34
RAB3BP20337 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
RAB3BP20337 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAB3BP20337 MRPL37P1-201ENST00000592451 1337 ntBASIC12.9□□□□□ -0.34
RAB3BP20337 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAB3BP20337 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC12.9□□□□□ -0.34
RAB3BP20337 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
RAB3BP20337 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 CENPM-205ENST00000404067 905 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 CENPM-206ENST00000407253 818 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 AC120114.3-201ENST00000611923 658 ntBASIC12.9□□□□□ -0.34
RAB3BP20337 AC009093.7-201ENST00000623853 1223 ntBASIC12.9□□□□□ -0.34
RAB3BP20337 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.9□□□□□ -0.34
RAB3BP20337 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.9□□□□□ -0.34
RAB3BP20337 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
RAB3BP20337 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
RAB3BP20337 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.9□□□□□ -0.35
RAB3BP20337 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.35
RAB3BP20337 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.89□□□□□ -0.35
RAB3BP20337 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB3BP20337 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 AC092053.3-201ENST00000641308 4975 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 DRD5P1-201ENST00000456605 1438 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 STRCP1-201ENST00000509801 5328 ntBASIC12.89□□□□□ -0.35
RAB3BP20337 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
RAB3BP20337 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
RAB3BP20337 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.89□□□□□ -0.35
RAB3BP20337 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
RAB3BP20337 PMP22-202ENST00000395936 816 ntTSL 3 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms