Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC24.1■■□□□ 1.45
CFTRP13569 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CFTRP13569 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC24.09■■□□□ 1.45
CFTRP13569 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
CFTRP13569 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC24.09■■□□□ 1.45
CFTRP13569 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC24.09■■□□□ 1.45
CFTRP13569 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC24.09■■□□□ 1.45
CFTRP13569 Z98885.3-201ENST00000624882 1757 ntBASIC24.09■■□□□ 1.45
CFTRP13569 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC24.09■■□□□ 1.45
CFTRP13569 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 RPSAP70-201ENST00000504462 864 ntBASIC24.09■■□□□ 1.45
CFTRP13569 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC24.09■■□□□ 1.45
CFTRP13569 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 AC006986.1-201ENST00000612764 241 ntBASIC24.09■■□□□ 1.45
CFTRP13569 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CFTRP13569 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CFTRP13569 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC24.09■■□□□ 1.45
CFTRP13569 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
CFTRP13569 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC24.09■■□□□ 1.45
CFTRP13569 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 AC068760.1-201ENST00000493579 1953 ntBASIC24.08■■□□□ 1.45
CFTRP13569 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CFTRP13569 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC24.08■■□□□ 1.45
CFTRP13569 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 KRTAP12-2-201ENST00000360770 739 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
CFTRP13569 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 TOMM5-203ENST00000401811 789 ntTSL 2 BASIC24.08■■□□□ 1.45
CFTRP13569 HNRNPA1P25-201ENST00000422644 937 ntBASIC24.08■■□□□ 1.45
CFTRP13569 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC24.08■■□□□ 1.45
CFTRP13569 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC24.08■■□□□ 1.45
CFTRP13569 KRT17P4-203ENST00000579355 621 ntTSL 3 BASIC24.08■■□□□ 1.45
CFTRP13569 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC24.08■■□□□ 1.45
CFTRP13569 AL353997.6-201ENST00000583394 621 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 AC005865.2-202ENST00000635814 725 ntBASIC24.08■■□□□ 1.45
CFTRP13569 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CFTRP13569 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CFTRP13569 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC24.08■■□□□ 1.45
CFTRP13569 AC026471.1-201ENST00000564629 3026 ntBASIC24.08■■□□□ 1.45
CFTRP13569 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CFTRP13569 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC24.08■■□□□ 1.45
CFTRP13569 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CFTRP13569 AGAP7P-201ENST00000582299 2062 ntBASIC24.08■■□□□ 1.44
CFTRP13569 AGAP14-201ENST00000624701 2060 ntBASIC24.08■■□□□ 1.44
CFTRP13569 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
CFTRP13569 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC24.07■■□□□ 1.44
CFTRP13569 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC24.07■■□□□ 1.44
CFTRP13569 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 TIMMDC1-207ENST00000493694 710 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC24.07■■□□□ 1.44
CFTRP13569 AP000920.1-201ENST00000531824 344 ntBASIC24.07■■□□□ 1.44
CFTRP13569 FXYD3-206ENST00000603524 742 ntTSL 3 BASIC24.07■■□□□ 1.44
CFTRP13569 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC24.07■■□□□ 1.44
CFTRP13569 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC24.07■■□□□ 1.44
CFTRP13569 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 AL008638.4-201ENST00000624792 1315 ntBASIC24.07■■□□□ 1.44
CFTRP13569 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC24.07■■□□□ 1.44
CFTRP13569 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CFTRP13569 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CFTRP13569 CCL19-202ENST00000378800 414 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC24.07■■□□□ 1.44
CFTRP13569 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 AL359092.2-201ENST00000423330 585 ntBASIC24.07■■□□□ 1.44
CFTRP13569 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 TPT1P6-201ENST00000458298 514 ntBASIC24.07■■□□□ 1.44
CFTRP13569 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 CD44-224ENST00000526669 870 ntTSL 5 BASIC24.07■■□□□ 1.44
CFTRP13569 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC24.07■■□□□ 1.44
CFTRP13569 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFTRP13569 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC24.06■■□□□ 1.44
CFTRP13569 AC064850.1-201ENST00000413279 1398 ntBASIC24.06■■□□□ 1.44
CFTRP13569 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CFTRP13569 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFTRP13569 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFTRP13569 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC24.06■■□□□ 1.44
CFTRP13569 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
CFTRP13569 AC068631.1-228ENST00000354642 742 ntTSL 5 BASIC24.06■■□□□ 1.44
CFTRP13569 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
CFTRP13569 MPV17-209ENST00000405983 859 ntTSL 5 BASIC24.06■■□□□ 1.44
CFTRP13569 IGKV1OR-2-201ENST00000457995 350 ntBASIC24.06■■□□□ 1.44
CFTRP13569 SNRPD2P2-201ENST00000473818 333 ntBASIC24.06■■□□□ 1.44
CFTRP13569 AC008494.1-201ENST00000497612 796 ntBASIC24.06■■□□□ 1.44
CFTRP13569 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC24.06■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms