Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 KRT18P25-201ENST00000508931 1278 ntBASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AP005019.2-201ENST00000615104 511 ntBASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TRAF4Q9BUZ4 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AC025279.2-201ENST00000569730 653 ntBASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 AC010328.2-201ENST00000597698 1111 ntBASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 MIR6869-201ENST00000619434 62 ntBASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
TRAF4Q9BUZ4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 AL138799.1-201ENST00000448213 1675 ntBASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.21□□□□□ -0.3
TRAF4Q9BUZ4 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRAF4Q9BUZ4 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms