Protein–RNA interactions for Protein: Q99741

CDC6, Cell division control protein 6 homolog, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC6Q99741 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 TMBIM7P-202ENST00000641474 1516 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.12□□□□□ -0.15
CDC6Q99741 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
CDC6Q99741 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC6Q99741 CST1-201ENST00000304749 760 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CDC6Q99741 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC6Q99741 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC6Q99741 AC024293.1-201ENST00000467930 498 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 AC084752.1-201ENST00000509766 622 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC6Q99741 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CDC6Q99741 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC6Q99741 AC003686.1-201ENST00000550956 1034 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC14.12□□□□□ -0.15
CDC6Q99741 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.12□□□□□ -0.15
CDC6Q99741 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.12□□□□□ -0.15
CDC6Q99741 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 OR2I1P-209ENST00000641730 5365 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDC6Q99741 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDC6Q99741 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC14.12□□□□□ -0.15
CDC6Q99741 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.12□□□□□ -0.15
CDC6Q99741 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.12□□□□□ -0.15
CDC6Q99741 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDC6Q99741 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC14.11□□□□□ -0.15
CDC6Q99741 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC6Q99741 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 AC007292.2-201ENST00000593524 1812 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 AC023090.2-201ENST00000625182 2110 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC6Q99741 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDC6Q99741 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDC6Q99741 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.11□□□□□ -0.15
CDC6Q99741 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 CR383656.3-201ENST00000551315 183 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDC6Q99741 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CDC6Q99741 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 LINC00431-202ENST00000636375 159 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 AC009093.10-201ENST00000641956 1442 ntBASIC14.11□□□□□ -0.15
CDC6Q99741 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.11□□□□□ -0.15
CDC6Q99741 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDC6Q99741 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.11□□□□□ -0.15
CDC6Q99741 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.1□□□□□ -0.15
CDC6Q99741 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC6Q99741 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC6Q99741 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDC6Q99741 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.1□□□□□ -0.15
CDC6Q99741 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CDC6Q99741 AC097376.2-205ENST00000610159 5334 ntBASIC14.1□□□□□ -0.15
CDC6Q99741 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms