Protein–RNA interactions for Protein: Q05901

CHRNB3, Neuronal acetylcholine receptor subunit beta-3, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3Q05901 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRNB3Q05901 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRNB3Q05901 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRNB3Q05901 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.98□□□□□ -0.17
CHRNB3Q05901 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRNB3Q05901 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHRNB3Q05901 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.98□□□□□ -0.17
CHRNB3Q05901 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CHRNB3Q05901 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CHRNB3Q05901 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CHRNB3Q05901 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 R3HDM2-204ENST00000402412 4372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 FAM90A12P-201ENST00000519497 2375 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 FAM90A24P-201ENST00000520792 2369 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 AC215219.1-201ENST00000400706 1817 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 AL035633.1-201ENST00000406139 838 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 AC004945.1-201ENST00000416738 983 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 RN7SL618P-201ENST00000477850 296 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 SDHAP3-202ENST00000515467 728 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 GPX4-206ENST00000588919 803 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 MIR6074-201ENST00000612054 107 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 AL109936.8-201ENST00000641772 604 ntBASIC13.97□□□□□ -0.17
CHRNB3Q05901 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CHRNB3Q05901 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.97□□□□□ -0.17
CHRNB3Q05901 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 C8orf49-201ENST00000525043 1968 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 AC092580.3-201ENST00000430932 139 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 AC002472.2-201ENST00000442739 958 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 GAPDHP40-201ENST00000505218 1006 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 AL512361.1-201ENST00000554200 418 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
CHRNB3Q05901 AL590560.3-201ENST00000623350 461 ntBASIC13.96□□□□□ -0.17
CHRNB3Q05901 RAB34-223ENST00000636154 730 ntTSL 2 BASIC13.96□□□□□ -0.17
CHRNB3Q05901 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms