Protein–RNA interactions for Protein: P12074

COX6A1, Cytochrome c oxidase subunit 6A1, mitochondrial, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX6A1P12074 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.41□□□□□ -0.26
COX6A1P12074 FGFR3P1-201ENST00000449999 601 ntBASIC13.41□□□□□ -0.26
COX6A1P12074 AP000358.1-201ENST00000456260 156 ntBASIC13.41□□□□□ -0.26
COX6A1P12074 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.41□□□□□ -0.26
COX6A1P12074 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.41□□□□□ -0.26
COX6A1P12074 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.41□□□□□ -0.26
COX6A1P12074 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.41□□□□□ -0.26
COX6A1P12074 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC13.41□□□□□ -0.26
COX6A1P12074 MIR4706-201ENST00000582134 82 ntBASIC13.41□□□□□ -0.26
COX6A1P12074 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 MIR6074-201ENST00000612054 107 ntBASIC13.41□□□□□ -0.26
COX6A1P12074 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.41□□□□□ -0.26
COX6A1P12074 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
COX6A1P12074 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.41□□□□□ -0.26
COX6A1P12074 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
COX6A1P12074 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 AC006480.2-201ENST00000609770 1337 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 AC064801.2-201ENST00000625052 1303 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
COX6A1P12074 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.4□□□□□ -0.26
COX6A1P12074 KRT8P31-201ENST00000504812 1408 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 MIR557-201ENST00000385239 98 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 RPS9P1-201ENST00000419943 583 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 DUTP3-201ENST00000450025 415 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 TPT1P11-201ENST00000458482 498 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 NEU3-205ENST00000531619 582 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC13.4□□□□□ -0.26
COX6A1P12074 AC140658.4-201ENST00000561990 352 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
COX6A1P12074 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 AC103691.2-201ENST00000618824 433 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 RETN-203ENST00000629642 400 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 TPO-203ENST00000346956 2923 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.4□□□□□ -0.26
COX6A1P12074 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.4□□□□□ -0.26
COX6A1P12074 DBET-201ENST00000630918 3363 ntBASIC13.4□□□□□ -0.26
COX6A1P12074 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
COX6A1P12074 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.4□□□□□ -0.27
COX6A1P12074 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.4□□□□□ -0.27
COX6A1P12074 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
COX6A1P12074 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
COX6A1P12074 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
COX6A1P12074 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.39□□□□□ -0.27
COX6A1P12074 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.39□□□□□ -0.27
COX6A1P12074 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms