Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTNSO60931 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTNSO60931 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CTNSO60931 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTNSO60931 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CTNSO60931 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
CTNSO60931 AC015656.1-201ENST00000624209 3578 ntBASIC13.75□□□□□ -0.21
CTNSO60931 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.74□□□□□ -0.21
CTNSO60931 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.74□□□□□ -0.21
CTNSO60931 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.74□□□□□ -0.21
CTNSO60931 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.74□□□□□ -0.21
CTNSO60931 AC007274.1-201ENST00000439805 662 ntBASIC13.74□□□□□ -0.21
CTNSO60931 AC104306.2-201ENST00000451877 341 ntBASIC13.74□□□□□ -0.21
CTNSO60931 AC108725.1-201ENST00000495472 409 ntBASIC13.74□□□□□ -0.21
CTNSO60931 AC092658.1-201ENST00000505836 891 ntBASIC13.74□□□□□ -0.21
CTNSO60931 IGHVIII-5-2-201ENST00000522505 261 ntBASIC13.74□□□□□ -0.21
CTNSO60931 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 AGER-214ENST00000538695 487 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.74□□□□□ -0.21
CTNSO60931 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.74□□□□□ -0.21
CTNSO60931 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
CTNSO60931 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 TMBIM7P-202ENST00000641474 1516 ntBASIC13.74□□□□□ -0.21
CTNSO60931 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.74□□□□□ -0.21
CTNSO60931 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
CTNSO60931 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CTNSO60931 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CTNSO60931 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.73□□□□□ -0.21
CTNSO60931 AC097359.2-201ENST00000604992 2389 ntBASIC13.73□□□□□ -0.21
CTNSO60931 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.73□□□□□ -0.21
CTNSO60931 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CTNSO60931 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 FAM86MP-201ENST00000340703 885 ntBASIC13.73□□□□□ -0.21
CTNSO60931 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CTNSO60931 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.73□□□□□ -0.21
CTNSO60931 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.73□□□□□ -0.21
CTNSO60931 RNMTL1P1-201ENST00000454103 560 ntBASIC13.73□□□□□ -0.21
CTNSO60931 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC13.73□□□□□ -0.21
CTNSO60931 AC126915.1-201ENST00000522847 1038 ntBASIC13.73□□□□□ -0.21
CTNSO60931 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.73□□□□□ -0.21
CTNSO60931 RBM8B-201ENST00000555532 525 ntBASIC13.73□□□□□ -0.21
CTNSO60931 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.73□□□□□ -0.21
CTNSO60931 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.73□□□□□ -0.21
CTNSO60931 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.73□□□□□ -0.21
CTNSO60931 BNIP3P13-201ENST00000599968 566 ntBASIC13.73□□□□□ -0.21
CTNSO60931 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CTNSO60931 AL008638.5-201ENST00000623814 1298 ntBASIC13.73□□□□□ -0.21
CTNSO60931 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.73□□□□□ -0.21
CTNSO60931 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CTNSO60931 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms