Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 AC112492.5-201ENST00000421897 457 ntBASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 AP001002.3-201ENST00000623482 206 ntBASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 TCAM1P-207ENST00000485295 1537 ntBASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 INE2-201ENST00000630399 1874 ntBASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NEUROD4Q9HD90 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 FKBP4P6-201ENST00000457486 1332 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC215219.1-201ENST00000400706 1817 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC103988.2-201ENST00000561804 725 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC015936.2-201ENST00000593177 259 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AC016397.2-201ENST00000624848 1985 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 AL590440.2-201ENST00000641973 1595 ntBASIC13.92□□□□□ -0.18
NEUROD4Q9HD90 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NEUROD4Q9HD90 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms