Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 RNF7-202ENST00000393000 805 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 RPL5P21-201ENST00000404620 815 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 RNA5SP420-201ENST00000516997 137 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AC103724.2-201ENST00000520355 476 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 NDUFB10P1-201ENST00000567319 521 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC13.26□□□□□ -0.29
CHD8Q9HCK8 MIR1587-201ENST00000583319 53 ntBASIC13.26□□□□□ -0.29
CHD8Q9HCK8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 FXYD3-210ENST00000604621 548 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 AL009176.1-201ENST00000607876 650 ntBASIC13.25□□□□□ -0.29
CHD8Q9HCK8 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 AC026336.4-201ENST00000624565 1050 ntBASIC13.25□□□□□ -0.29
CHD8Q9HCK8 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 AC105250.1-201ENST00000509378 2057 ntBASIC13.25□□□□□ -0.29
CHD8Q9HCK8 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 PHBP10-201ENST00000416467 784 ntBASIC13.25□□□□□ -0.29
CHD8Q9HCK8 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC13.25□□□□□ -0.29
CHD8Q9HCK8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC090340.1-201ENST00000620778 4980 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 KHSRPP1-201ENST00000427983 1768 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 SFTPA2-202ENST00000372327 815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 DNM1P46-202ENST00000415963 882 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 CCND3P1-201ENST00000438347 580 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC023051.2-201ENST00000541141 460 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 MIR4309-201ENST00000582498 83 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC097474.1-201ENST00000506481 1371 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC139712.1-201ENST00000378256 1875 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC080080.1-201ENST00000625121 2420 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 PSME2P2-201ENST00000453033 700 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AL390961.2-201ENST00000454991 472 ntTSL 3 BASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AF186996.6-201ENST00000485294 149 ntBASIC13.24□□□□□ -0.29
CHD8Q9HCK8 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms