Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.81□□□□□ -0.36
CCDC107Q8WV48 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AL589987.1-201ENST00000453380 819 ntBASIC12.8□□□□□ -0.36
CCDC107Q8WV48 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 MEIS3P1-201ENST00000495167 958 ntBASIC12.8□□□□□ -0.36
CCDC107Q8WV48 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CCDC107Q8WV48 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 PON3-203ENST00000427422 894 ntTSL 3 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 SPDYE18-201ENST00000510091 1050 ntBASIC12.79□□□□□ -0.36
CCDC107Q8WV48 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC12.79□□□□□ -0.36
CCDC107Q8WV48 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms