Protein–RNA interactions for Protein: Q8N7P3

CLDN22, Claudin-22, humanhuman

Predictions only

Length 220 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN22Q8N7P3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TMEM261P1-201ENST00000604899 340 ntBASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AL096865.1-201ENST00000606796 927 ntBASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 AC073548.1-201ENST00000624088 1882 ntBASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 LRRC59-203ENST00000576448 1531 ntBASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CLDN22Q8N7P3 NUTM2HP-201ENST00000442076 2498 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AC015688.4-201ENST00000580780 1647 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 FAM207CP-201ENST00000443486 507 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AC103988.2-201ENST00000561804 725 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AC004466.1-201ENST00000599515 1080 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AC133539.2-201ENST00000604757 467 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 WFDC1-204ENST00000613603 549 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AP001002.3-201ENST00000623482 206 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 AL391825.1-201ENST00000457671 1364 ntBASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
CLDN22Q8N7P3 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms