Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 FLAD1-202ENST00000295530 1211 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 TXNL4B-203ENST00000426362 965 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 AC078814.4-201ENST00000546650 327 ntBASIC19.62■□□□□ 0.73
XRN1Q8IZH2 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 AC020931.1-201ENST00000589622 1346 ntBASIC19.62■□□□□ 0.73
XRN1Q8IZH2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC19.62■□□□□ 0.73
XRN1Q8IZH2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 PES1P2-201ENST00000449745 1735 ntBASIC19.61■□□□□ 0.73
XRN1Q8IZH2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AC092810.2-201ENST00000431570 362 ntBASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AC133141.1-201ENST00000443015 339 ntBASIC19.61■□□□□ 0.73
XRN1Q8IZH2 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 GPX3-202ENST00000517973 612 ntTSL 3 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 SRP14-208ENST00000560773 468 ntTSL 3 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 HAMP-203ENST00000598398 652 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 AC110057.1-201ENST00000636031 898 ntBASIC19.61■□□□□ 0.73
XRN1Q8IZH2 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
XRN1Q8IZH2 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 FDPSP7-201ENST00000429043 1054 ntBASIC19.6■□□□□ 0.73
XRN1Q8IZH2 SALL4P6-201ENST00000429385 1691 ntBASIC19.6■□□□□ 0.73
XRN1Q8IZH2 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 KRT8P34-201ENST00000577607 1044 ntBASIC19.6■□□□□ 0.73
XRN1Q8IZH2 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 AC068760.1-201ENST00000493579 1953 ntBASIC19.6■□□□□ 0.73
XRN1Q8IZH2 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
XRN1Q8IZH2 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 U73169.1-201ENST00000395152 367 ntBASIC19.59■□□□□ 0.73
XRN1Q8IZH2 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 CD44-224ENST00000526669 870 ntTSL 5 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 MED11-202ENST00000573708 802 ntTSL 2 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 AC105917.1-201ENST00000506637 2539 ntBASIC19.59■□□□□ 0.73
XRN1Q8IZH2 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
XRN1Q8IZH2 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms