Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USH1GQ495M9 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USH1GQ495M9 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
USH1GQ495M9 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.81■□□□□ 0.28
USH1GQ495M9 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.81■□□□□ 0.28
USH1GQ495M9 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC16.81■□□□□ 0.28
USH1GQ495M9 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.81■□□□□ 0.28
USH1GQ495M9 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.81■□□□□ 0.28
USH1GQ495M9 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.81■□□□□ 0.28
USH1GQ495M9 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
USH1GQ495M9 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.81■□□□□ 0.28
USH1GQ495M9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 LINC02228-204ENST00000642115 2962 ntBASIC16.8■□□□□ 0.28
USH1GQ495M9 KRT8P21-201ENST00000430398 1491 ntBASIC16.8■□□□□ 0.28
USH1GQ495M9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
USH1GQ495M9 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.8■□□□□ 0.28
USH1GQ495M9 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.8■□□□□ 0.28
USH1GQ495M9 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 AL596276.2-201ENST00000447525 331 ntBASIC16.8■□□□□ 0.28
USH1GQ495M9 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.8■□□□□ 0.28
USH1GQ495M9 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 ARL16-210ENST00000574938 751 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 AC084346.2-201ENST00000607097 949 ntBASIC16.8■□□□□ 0.28
USH1GQ495M9 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
USH1GQ495M9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.8■□□□□ 0.28
USH1GQ495M9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
USH1GQ495M9 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.8■□□□□ 0.28
USH1GQ495M9 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
USH1GQ495M9 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.79■□□□□ 0.28
USH1GQ495M9 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms