Protein–RNA interactions for Protein: P55196

AFDN, Afadin, humanhuman

Known RBP Predictions only

Length 1,824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFDNP55196 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC18.08■□□□□ 0.48
AFDNP55196 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC18.08■□□□□ 0.48
AFDNP55196 RN7SL530P-201ENST00000485097 298 ntBASIC18.08■□□□□ 0.48
AFDNP55196 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC18.08■□□□□ 0.48
AFDNP55196 AP003068.3-201ENST00000527789 175 ntTSL 2 BASIC18.08■□□□□ 0.48
AFDNP55196 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC18.08■□□□□ 0.48
AFDNP55196 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC18.08■□□□□ 0.48
AFDNP55196 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC18.08■□□□□ 0.48
AFDNP55196 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
AFDNP55196 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.08■□□□□ 0.48
AFDNP55196 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC18.08■□□□□ 0.48
AFDNP55196 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
AFDNP55196 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC18.07■□□□□ 0.48
AFDNP55196 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
AFDNP55196 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC18.07■□□□□ 0.48
AFDNP55196 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC18.07■□□□□ 0.48
AFDNP55196 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.07■□□□□ 0.48
AFDNP55196 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.07■□□□□ 0.48
AFDNP55196 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 AL451007.2-201ENST00000632004 563 ntBASIC18.07■□□□□ 0.48
AFDNP55196 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC18.07■□□□□ 0.48
AFDNP55196 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.07■□□□□ 0.48
AFDNP55196 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.07■□□□□ 0.48
AFDNP55196 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 ACTBP7-201ENST00000418351 1124 ntBASIC18.07■□□□□ 0.48
AFDNP55196 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 AC106047.2-201ENST00000511723 743 ntBASIC18.07■□□□□ 0.48
AFDNP55196 IGHV1-12-201ENST00000518307 205 ntBASIC18.07■□□□□ 0.48
AFDNP55196 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC18.07■□□□□ 0.48
AFDNP55196 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.07■□□□□ 0.48
AFDNP55196 SIGLEC22P-201ENST00000599104 714 ntBASIC18.07■□□□□ 0.48
AFDNP55196 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 MPI-203ENST00000535694 1523 ntTSL 2 BASIC18.07■□□□□ 0.48
AFDNP55196 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
AFDNP55196 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.06■□□□□ 0.48
AFDNP55196 LINC00552-201ENST00000625151 2579 ntBASIC18.06■□□□□ 0.48
AFDNP55196 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC18.06■□□□□ 0.48
AFDNP55196 BX640514.1-201ENST00000583223 1918 ntBASIC18.06■□□□□ 0.48
AFDNP55196 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
AFDNP55196 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.06■□□□□ 0.48
AFDNP55196 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC18.06■□□□□ 0.48
AFDNP55196 AC104506.1-201ENST00000609247 429 ntBASIC18.06■□□□□ 0.48
AFDNP55196 ST5-261ENST00000626808 1071 ntTSL 5 BASIC18.06■□□□□ 0.48
AFDNP55196 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.06■□□□□ 0.48
AFDNP55196 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.06■□□□□ 0.48
AFDNP55196 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.06■□□□□ 0.48
AFDNP55196 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
AFDNP55196 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms