Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 FAM58BP-201ENST00000439056 645 ntBASIC13.29□□□□□ -0.28
APOBEC1P41238 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.29□□□□□ -0.28
APOBEC1P41238 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.29□□□□□ -0.28
APOBEC1P41238 AC100850.1-201ENST00000506768 649 ntBASIC13.29□□□□□ -0.28
APOBEC1P41238 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC13.29□□□□□ -0.28
APOBEC1P41238 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
APOBEC1P41238 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
APOBEC1P41238 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.28□□□□□ -0.28
APOBEC1P41238 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
APOBEC1P41238 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 GK-202ENST00000378941 458 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 HNRNPA1P27-201ENST00000412087 955 ntBASIC13.28□□□□□ -0.28
APOBEC1P41238 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 AC132192.2-201ENST00000596206 1147 ntBASIC13.28□□□□□ -0.28
APOBEC1P41238 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.28□□□□□ -0.28
APOBEC1P41238 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.28□□□□□ -0.28
APOBEC1P41238 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.28□□□□□ -0.28
APOBEC1P41238 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.28□□□□□ -0.28
APOBEC1P41238 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
APOBEC1P41238 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.27□□□□□ -0.28
APOBEC1P41238 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.27□□□□□ -0.28
APOBEC1P41238 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
APOBEC1P41238 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.27□□□□□ -0.28
APOBEC1P41238 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
APOBEC1P41238 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.27□□□□□ -0.28
APOBEC1P41238 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.27□□□□□ -0.29
APOBEC1P41238 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
APOBEC1P41238 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
APOBEC1P41238 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.27□□□□□ -0.29
APOBEC1P41238 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.27□□□□□ -0.29
APOBEC1P41238 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 81.2 ms