Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 GRAMD4P2-201ENST00000423297 1097 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CKBP1-201ENST00000565489 1086 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AL162615.1-201ENST00000429893 1653 ntBASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CTBP2-201ENST00000309035 3669 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ARHGEF4-201ENST00000326016 3666 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 VPS33A-201ENST00000267199 4586 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AMACR-201ENST00000335606 4153 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ZNF589-201ENST00000354698 3368 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CALCOCO1-201ENST00000262059 5866 ntAPPRIS ALT1 TSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 UBIAD1-202ENST00000376810 3646 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CLSTN3-207ENST00000537408 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ARHGEF9-220ENST00000635729 1761 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ALDH7A1-234ENST00000637782 1773 ntAPPRIS ALT1 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 UBA52-202ENST00000442744 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ITGA10-201ENST00000369304 5269 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 GP6-203ENST00000417454 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 SYT10-201ENST00000228567 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 PLAGL1-209ENST00000444202 3197 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 AP5S1-205ENST00000615891 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 EBF2-201ENST00000408929 1888 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 OR4D9-203ENST00000641962 6123 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ZDHHC9-201ENST00000357166 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 CHAT-204ENST00000395559 2114 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ITGBL1-205ENST00000545560 4808 ntTSL 2 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC7.3□□□□□ -1.24
CDC42SE1Q9NRR8 ESRP2-210ENST00000565858 3386 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LNP1-201ENST00000383693 2210 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 DPY19L3-201ENST00000342179 6015 ntAPPRIS P1 TSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PDE6B-212ENST00000496514 3232 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 GTPBP2-201ENST00000307114 2830 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PNMA6F-201ENST00000436629 3348 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SUN2-202ENST00000405510 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PARP15-205ENST00000483793 4439 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SEC14L1-203ENST00000431431 2504 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 MORC2-AS1-201ENST00000422995 2274 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SCN3B-206ENST00000530277 3984 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 FHAD1-202ENST00000358897 5090 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 GHSR-202ENST00000427970 912 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 AC104390.1-201ENST00000555663 520 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 AC012414.1-201ENST00000556676 535 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 AL121672.3-201ENST00000608644 468 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 SERF2-217ENST00000630046 862 ntTSL 5 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 KLHDC4-205ENST00000446344 4444 ntBASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 MAN1C1-202ENST00000374329 2461 ntTSL 2 BASIC7.29□□□□□ -1.24
CDC42SE1Q9NRR8 KIF22-202ENST00000400751 2493 ntTSL 2 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms