RNA–Protein interactions for RNA: ENST00000446344.3

KLHDC4-205, Transcript of kelch domain containing 4, humanhuman

BASIC

Gene KLHDC4, Length 4,444 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-205ENST00000446344 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
KLHDC4-205ENST00000446344 DCAF8L2P0C7V8 631 aa21.77■■□□□ 1.08
KLHDC4-205ENST00000446344 SUPT5HO00267 1087 aaKnown RBP20.24■□□□□ 0.83
KLHDC4-205ENST00000446344 SHROOM4Q9ULL8 1493 aa20.17■□□□□ 0.82
KLHDC4-205ENST00000446344 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
KLHDC4-205ENST00000446344 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
KLHDC4-205ENST00000446344 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
KLHDC4-205ENST00000446344 TTBK1Q5TCY1 1321 aaPredicted RBP18.82■□□□□ 0.6
KLHDC4-205ENST00000446344 PCGF6Q9BYE7 350 aa18.79■□□□□ 0.6
KLHDC4-205ENST00000446344 ABCC9O60706 1549 aa18.7■□□□□ 0.58
KLHDC4-205ENST00000446344 CCDC180Q9P1Z9 1646 aa18.69■□□□□ 0.58
KLHDC4-205ENST00000446344 TRIM41Q8WV44 630 aa18.69■□□□□ 0.58
KLHDC4-205ENST00000446344 APLP2Q06481 763 aa18.68■□□□□ 0.58
KLHDC4-205ENST00000446344 CHIC1Q5VXU3 224 aa18.64■□□□□ 0.57
KLHDC4-205ENST00000446344 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
KLHDC4-205ENST00000446344 ATP1B4Q9UN42 357 aaPredicted RBP18.54■□□□□ 0.56
KLHDC4-205ENST00000446344 PABPN1Q86U42 306 aaKnown RBP eCLIP18.5■□□□□ 0.55
KLHDC4-205ENST00000446344 UBTFP17480 764 aaKnown RBP18.41■□□□□ 0.54
KLHDC4-205ENST00000446344 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
KLHDC4-205ENST00000446344 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
KLHDC4-205ENST00000446344 HRCP23327 699 aa18.28■□□□□ 0.52
KLHDC4-205ENST00000446344 TRIM26Q12899 539 aaPredicted RBP18.27■□□□□ 0.51
KLHDC4-205ENST00000446344 PPARGC1BQ86YN6 1023 aaKnown RBP18.21■□□□□ 0.51
KLHDC4-205ENST00000446344 SCRIBQ14160 1630 aa18.14■□□□□ 0.49
KLHDC4-205ENST00000446344 CCER1Q8TC90 406 aaPredicted RBP18.12■□□□□ 0.49
KLHDC4-205ENST00000446344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.99■□□□□ 0.47
KLHDC4-205ENST00000446344 HNRNPUL2Q1KMD3 747 aaKnown RBP17.99■□□□□ 0.47
KLHDC4-205ENST00000446344 PELP1Q8IZL8 1130 aaKnown RBP17.95■□□□□ 0.46
KLHDC4-205ENST00000446344 DCAF1Q9Y4B6 1507 aa17.94■□□□□ 0.46
KLHDC4-205ENST00000446344 ITGAEP38570 1179 aa17.86■□□□□ 0.45
KLHDC4-205ENST00000446344 NACADO15069 1562 aa17.85■□□□□ 0.45
KLHDC4-205ENST00000446344 RB1CC1Q8TDY2 1594 aa17.84■□□□□ 0.45
KLHDC4-205ENST00000446344 CENPBP07199 599 aaPredicted RBP17.84■□□□□ 0.45
KLHDC4-205ENST00000446344 MYT1LQ9UL68 1186 aa17.83■□□□□ 0.44
KLHDC4-205ENST00000446344 FBLN2P98095 1184 aa17.71■□□□□ 0.42
KLHDC4-205ENST00000446344 RSF1Q96T23 1441 aaPredicted RBP17.69■□□□□ 0.42
KLHDC4-205ENST00000446344 MYO15BQ96JP2 1530 aa17.62■□□□□ 0.41
KLHDC4-205ENST00000446344 MYT1Q01538 1121 aa17.51■□□□□ 0.39
KLHDC4-205ENST00000446344 YTHDC1Q96MU7 727 aaKnown RBP17.5■□□□□ 0.39
KLHDC4-205ENST00000446344 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
KLHDC4-205ENST00000446344 CECR2Q9BXF3 1484 aa17.46■□□□□ 0.39
KLHDC4-205ENST00000446344 ARID3CA6NKF2 412 aa17.45■□□□□ 0.38
KLHDC4-205ENST00000446344 POLR3GLQ9BT43 218 aa17.41■□□□□ 0.38
KLHDC4-205ENST00000446344 P3H3Q8IVL6 736 aa17.41■□□□□ 0.38
KLHDC4-205ENST00000446344 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
KLHDC4-205ENST00000446344 CNGB1Q14028 1251 aaPredicted RBP17.4■□□□□ 0.38
KLHDC4-205ENST00000446344 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
KLHDC4-205ENST00000446344 FAM50AQ14320 339 aaKnown RBP17.34■□□□□ 0.37
KLHDC4-205ENST00000446344 MROH2BQ7Z745 1585 aa17.28■□□□□ 0.36
KLHDC4-205ENST00000446344 BAZ1BQ9UIG0 1483 aaKnown RBP17.24■□□□□ 0.35
KLHDC4-205ENST00000446344 TRIM52Q96A61 297 aa17.16■□□□□ 0.34
KLHDC4-205ENST00000446344 NEFLP07196 543 aa17.14■□□□□ 0.34
KLHDC4-205ENST00000446344 WRNQ14191 1432 aaPredicted RBP eCLIP17.13■□□□□ 0.33
KLHDC4-205ENST00000446344 EEA1Q15075 1411 aa17.13■□□□□ 0.33
KLHDC4-205ENST00000446344 ZNF316A6NFI3 1004 aaPredicted RBP17.13■□□□□ 0.33
KLHDC4-205ENST00000446344 SCAF1Q9H7N4 1312 aaKnown RBP17.12■□□□□ 0.33
KLHDC4-205ENST00000446344 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
KLHDC4-205ENST00000446344 ERICH6Q7L0X2 663 aa17.07■□□□□ 0.32
KLHDC4-205ENST00000446344 ZNF777Q9ULD5 760 aaPredicted RBP17.06■□□□□ 0.32
KLHDC4-205ENST00000446344 WIZO95785 1651 aa17.06■□□□□ 0.32
KLHDC4-205ENST00000446344 NEUROD1Q13562 356 aa17.05■□□□□ 0.32
KLHDC4-205ENST00000446344 CCDC88BA6NC98 1476 aa17.04■□□□□ 0.32
KLHDC4-205ENST00000446344 GTF3C3Q9Y5Q9 886 aa17.04■□□□□ 0.32
KLHDC4-205ENST00000446344 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
KLHDC4-205ENST00000446344 ZNF326Q5BKZ1 582 aaKnown RBP17.02■□□□□ 0.32
KLHDC4-205ENST00000446344 GOLGA3Q08378 1498 aa16.99■□□□□ 0.31
KLHDC4-205ENST00000446344 TNIKQ9UKE5 1360 aa16.98■□□□□ 0.31
KLHDC4-205ENST00000446344 TOP2AP11388 1531 aaKnown RBP16.98■□□□□ 0.31
KLHDC4-205ENST00000446344 CLIP1P30622 1438 aa16.97■□□□□ 0.31
KLHDC4-205ENST00000446344 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
KLHDC4-205ENST00000446344 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
KLHDC4-205ENST00000446344 ACIN1Q9UKV3 1341 aaKnown RBP16.94■□□□□ 0.3
KLHDC4-205ENST00000446344 SMARCA4P51532 1647 aa16.93■□□□□ 0.3
KLHDC4-205ENST00000446344 CHMP7Q8WUX9 453 aaPredicted RBP16.89■□□□□ 0.29
KLHDC4-205ENST00000446344 ABCC8Q09428 1581 aa16.88■□□□□ 0.29
KLHDC4-205ENST00000446344 CEP164Q9UPV0 1460 aa16.87■□□□□ 0.29
KLHDC4-205ENST00000446344 SOGA1O94964 1423 aa16.87■□□□□ 0.29
KLHDC4-205ENST00000446344 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
KLHDC4-205ENST00000446344 NPM1P06748 294 aaKnown RBP eCLIP16.86■□□□□ 0.29
KLHDC4-205ENST00000446344 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
KLHDC4-205ENST00000446344 BCANQ96GW7 911 aa16.84■□□□□ 0.29
KLHDC4-205ENST00000446344 CDK11AQ9UQ88 783 aaPredicted RBP16.82■□□□□ 0.28
KLHDC4-205ENST00000446344 CHIC2Q9UKJ5 165 aa16.74■□□□□ 0.27
KLHDC4-205ENST00000446344 ANP32CO43423 234 aa16.73■□□□□ 0.27
KLHDC4-205ENST00000446344 CHGAP10645 457 aaKnown RBP16.71■□□□□ 0.26
KLHDC4-205ENST00000446344 ESF1Q9H501 851 aaKnown RBP16.71■□□□□ 0.26
KLHDC4-205ENST00000446344 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
KLHDC4-205ENST00000446344 CUX2O14529 1486 aa16.67■□□□□ 0.26
KLHDC4-205ENST00000446344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
KLHDC4-205ENST00000446344 SENP3Q9H4L4 574 aaPredicted RBP16.64■□□□□ 0.25
KLHDC4-205ENST00000446344 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
KLHDC4-205ENST00000446344 MTUS2Q5JR59 1369 aa16.62■□□□□ 0.25
KLHDC4-205ENST00000446344 CARMIL1Q5VZK9 1371 aa16.61■□□□□ 0.25
KLHDC4-205ENST00000446344 VPS8Q8N3P4 1428 aa16.59■□□□□ 0.25
KLHDC4-205ENST00000446344 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
KLHDC4-205ENST00000446344 ERCC6Q03468 1493 aa16.59■□□□□ 0.25
KLHDC4-205ENST00000446344 MIER1Q8N108 512 aa16.59■□□□□ 0.25
KLHDC4-205ENST00000446344 TONSLQ96HA7 1378 aa16.59■□□□□ 0.25
KLHDC4-205ENST00000446344 CLSPNQ9HAW4 1339 aa16.57■□□□□ 0.24
KLHDC4-205ENST00000446344 PDS5BQ9NTI5 1447 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms