RNA–Protein interactions for RNA: ENST00000545560.6

ITGBL1-205, Transcript of integrin subunit beta like 1, humanhuman

TSL 2 BASIC

Gene ITGBL1, Length 4,808 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGBL1-205ENST00000545560 NISCHQ9Y2I1 1504 aa19.7■□□□□ 0.74
ITGBL1-205ENST00000545560 DCAF8L2P0C7V8 631 aa19.28■□□□□ 0.68
ITGBL1-205ENST00000545560 SUPT5HO00267 1087 aaKnown RBP18.99■□□□□ 0.63
ITGBL1-205ENST00000545560 SHROOM4Q9ULL8 1493 aa18.69■□□□□ 0.58
ITGBL1-205ENST00000545560 PCGF6Q9BYE7 350 aa18.14■□□□□ 0.49
ITGBL1-205ENST00000545560 EHMT2Q96KQ7 1210 aa18.03■□□□□ 0.48
ITGBL1-205ENST00000545560 PELP1Q8IZL8 1130 aaKnown RBP17.96■□□□□ 0.47
ITGBL1-205ENST00000545560 ZEB1P37275 1124 aaPredicted RBP17.8■□□□□ 0.44
ITGBL1-205ENST00000545560 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
ITGBL1-205ENST00000545560 MYT1Q01538 1121 aa17.75■□□□□ 0.43
ITGBL1-205ENST00000545560 HRCP23327 699 aa17.65■□□□□ 0.42
ITGBL1-205ENST00000545560 APLP2Q06481 763 aa17.61■□□□□ 0.41
ITGBL1-205ENST00000545560 TRIM41Q8WV44 630 aa17.6■□□□□ 0.41
ITGBL1-205ENST00000545560 CENPBP07199 599 aaPredicted RBP17.6■□□□□ 0.41
ITGBL1-205ENST00000545560 CCER1Q8TC90 406 aaPredicted RBP17.51■□□□□ 0.39
ITGBL1-205ENST00000545560 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
ITGBL1-205ENST00000545560 TRIM26Q12899 539 aaPredicted RBP17.46■□□□□ 0.39
ITGBL1-205ENST00000545560 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
ITGBL1-205ENST00000545560 LOC105371045A0A1W2PR82 267 aa17.27■□□□□ 0.36
ITGBL1-205ENST00000545560 PPARGC1BQ86YN6 1023 aaKnown RBP17.22■□□□□ 0.35
ITGBL1-205ENST00000545560 UBTFP17480 764 aaKnown RBP17.19■□□□□ 0.34
ITGBL1-205ENST00000545560 YTHDC1Q96MU7 727 aaKnown RBP17.12■□□□□ 0.33
ITGBL1-205ENST00000545560 RANGAP1P46060 587 aaPredicted RBP17.12■□□□□ 0.33
ITGBL1-205ENST00000545560 ERICH6Q7L0X2 663 aa16.97■□□□□ 0.31
ITGBL1-205ENST00000545560 NEFLP07196 543 aa16.91■□□□□ 0.3
ITGBL1-205ENST00000545560 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.83■□□□□ 0.28
ITGBL1-205ENST00000545560 DIEXFQ68CQ4 756 aaKnown RBP16.82■□□□□ 0.28
ITGBL1-205ENST00000545560 ATP1B4Q9UN42 357 aaPredicted RBP16.82■□□□□ 0.28
ITGBL1-205ENST00000545560 HNRNPUL2Q1KMD3 747 aaKnown RBP16.75■□□□□ 0.27
ITGBL1-205ENST00000545560 GTF3C3Q9Y5Q9 886 aa16.61■□□□□ 0.25
ITGBL1-205ENST00000545560 ITGAEP38570 1179 aa16.59■□□□□ 0.25
ITGBL1-205ENST00000545560 DCAF1Q9Y4B6 1507 aa16.56■□□□□ 0.24
ITGBL1-205ENST00000545560 ACIN1Q9UKV3 1341 aaKnown RBP16.52■□□□□ 0.23
ITGBL1-205ENST00000545560 ZNF316A6NFI3 1004 aaPredicted RBP16.46■□□□□ 0.23
ITGBL1-205ENST00000545560 ZCCHC6Q5VYS8 1495 aaKnown RBP16.44■□□□□ 0.22
ITGBL1-205ENST00000545560 MYO15BQ96JP2 1530 aa16.3■□□□□ 0.2
ITGBL1-205ENST00000545560 CSRNP3Q8WYN3 585 aa16.25■□□□□ 0.19
ITGBL1-205ENST00000545560 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
ITGBL1-205ENST00000545560 ABCC9O60706 1549 aa16.22■□□□□ 0.19
ITGBL1-205ENST00000545560 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
ITGBL1-205ENST00000545560 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
ITGBL1-205ENST00000545560 BCANQ96GW7 911 aa16.21■□□□□ 0.19
ITGBL1-205ENST00000545560 NEUROD1Q13562 356 aa16.19■□□□□ 0.18
ITGBL1-205ENST00000545560 DAXXQ9UER7 740 aaPredicted RBP16.17■□□□□ 0.18
ITGBL1-205ENST00000545560 ANP32CO43423 234 aa16.14■□□□□ 0.17
ITGBL1-205ENST00000545560 CNGB1Q14028 1251 aaPredicted RBP16.14■□□□□ 0.17
ITGBL1-205ENST00000545560 CLSPNQ9HAW4 1339 aa16.11■□□□□ 0.17
ITGBL1-205ENST00000545560 PABPN1Q86U42 306 aaKnown RBP eCLIP16.1■□□□□ 0.17
ITGBL1-205ENST00000545560 RTL5Q5HYW3 569 aaPredicted RBP16.09■□□□□ 0.17
ITGBL1-205ENST00000545560 CCDC180Q9P1Z9 1646 aa16.05■□□□□ 0.16
ITGBL1-205ENST00000545560 CDK11AQ9UQ88 783 aaPredicted RBP16.05■□□□□ 0.16
ITGBL1-205ENST00000545560 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
ITGBL1-205ENST00000545560 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
ITGBL1-205ENST00000545560 MIER1Q8N108 512 aa15.93■□□□□ 0.14
ITGBL1-205ENST00000545560 FKBP8Q14318 412 aa15.91■□□□□ 0.14
ITGBL1-205ENST00000545560 RSF1Q96T23 1441 aaPredicted RBP15.9■□□□□ 0.14
ITGBL1-205ENST00000545560 DDX10Q13206 875 aaKnown RBP15.83■□□□□ 0.12
ITGBL1-205ENST00000545560 P3H3Q8IVL6 736 aa15.81■□□□□ 0.12
ITGBL1-205ENST00000545560 MYT1LQ9UL68 1186 aa15.8■□□□□ 0.12
ITGBL1-205ENST00000545560 ZNF326Q5BKZ1 582 aaKnown RBP15.79■□□□□ 0.12
ITGBL1-205ENST00000545560 CEP162Q5TB80 1403 aa15.79■□□□□ 0.12
ITGBL1-205ENST00000545560 TONSLQ96HA7 1378 aa15.77■□□□□ 0.11
ITGBL1-205ENST00000545560 CLIP1P30622 1438 aa15.76■□□□□ 0.11
ITGBL1-205ENST00000545560 EEA1Q15075 1411 aa15.76■□□□□ 0.11
ITGBL1-205ENST00000545560 HNRNPUQ00839 825 aaKnown RBP eCLIP15.74■□□□□ 0.11
ITGBL1-205ENST00000545560 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
ITGBL1-205ENST00000545560 GOLGA3Q08378 1498 aa15.69■□□□□ 0.1
ITGBL1-205ENST00000545560 TNIKQ9UKE5 1360 aa15.69■□□□□ 0.1
ITGBL1-205ENST00000545560 SLC4A1APQ9BWU0 796 aaKnown RBP15.66■□□□□ 0.1
ITGBL1-205ENST00000545560 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
ITGBL1-205ENST00000545560 FAM9BQ8IZU0 186 aa15.61■□□□□ 0.09
ITGBL1-205ENST00000545560 NPM2Q86SE8 214 aaKnown RBP15.57■□□□□ 0.08
ITGBL1-205ENST00000545560 ARID3CA6NKF2 412 aa15.56■□□□□ 0.08
ITGBL1-205ENST00000545560 WRNQ14191 1432 aaPredicted RBP eCLIP15.55■□□□□ 0.08
ITGBL1-205ENST00000545560 ANP32EQ9BTT0 268 aa15.54■□□□□ 0.08
ITGBL1-205ENST00000545560 HIRIP3Q9BW71 556 aaPredicted RBP15.54■□□□□ 0.08
ITGBL1-205ENST00000545560 CEP164Q9UPV0 1460 aa15.53■□□□□ 0.08
ITGBL1-205ENST00000545560 CCDC136Q96JN2 1154 aa15.52■□□□□ 0.07
ITGBL1-205ENST00000545560 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
ITGBL1-205ENST00000545560 IRX6P78412 446 aaPredicted RBP15.49■□□□□ 0.07
ITGBL1-205ENST00000545560 SUPT16HQ9Y5B9 1047 aaKnown RBP15.49■□□□□ 0.07
ITGBL1-205ENST00000545560 CANXP27824 592 aaKnown RBP15.48■□□□□ 0.07
ITGBL1-205ENST00000545560 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
ITGBL1-205ENST00000545560 ZBTB47Q9UFB7 747 aaPredicted RBP15.47■□□□□ 0.07
ITGBL1-205ENST00000545560 CHIC2Q9UKJ5 165 aa15.47■□□□□ 0.07
ITGBL1-205ENST00000545560 MTUS2Q5JR59 1369 aa15.46■□□□□ 0.06
ITGBL1-205ENST00000545560 TMC1Q8TDI8 760 aa15.45■□□□□ 0.06
ITGBL1-205ENST00000545560 EIF4G2P78344 907 aaKnown RBP eCLIP15.45■□□□□ 0.06
ITGBL1-205ENST00000545560 NBR1Q14596 966 aa15.45■□□□□ 0.06
ITGBL1-205ENST00000545560 CECR2Q9BXF3 1484 aa15.44■□□□□ 0.06
ITGBL1-205ENST00000545560 NACADO15069 1562 aa15.44■□□□□ 0.06
ITGBL1-205ENST00000545560 FBLN2P98095 1184 aa15.43■□□□□ 0.06
ITGBL1-205ENST00000545560 BCL11AQ9H165 835 aa15.43■□□□□ 0.06
ITGBL1-205ENST00000545560 SOGA1O94964 1423 aa15.4■□□□□ 0.06
ITGBL1-205ENST00000545560 BAZ1AQ9NRL2 1556 aaPredicted RBP15.4■□□□□ 0.06
ITGBL1-205ENST00000545560 SALL2Q9Y467 1007 aaPredicted RBP15.38■□□□□ 0.05
ITGBL1-205ENST00000545560 SIN3AQ96ST3 1273 aa15.34■□□□□ 0.05
ITGBL1-205ENST00000545560 KIF27Q86VH2 1401 aa15.34■□□□□ 0.05
ITGBL1-205ENST00000545560 CCNB3Q8WWL7 1395 aa15.33■□□□□ 0.04
ITGBL1-205ENST00000545560 EIF5BO60841 1220 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms