RNA–Protein interactions for RNA: ENST00000369304.7

ITGA10-201, Transcript of integrin subunit alpha 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA10, Length 5,269 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA10-201ENST00000369304 NISCHQ9Y2I1 1504 aa21.04■□□□□ 0.96
ITGA10-201ENST00000369304 DCAF8L2P0C7V8 631 aa18.7■□□□□ 0.58
ITGA10-201ENST00000369304 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
ITGA10-201ENST00000369304 SUPT5HO00267 1087 aaKnown RBP18.3■□□□□ 0.52
ITGA10-201ENST00000369304 CCDC180Q9P1Z9 1646 aa17.92■□□□□ 0.46
ITGA10-201ENST00000369304 PELP1Q8IZL8 1130 aaKnown RBP17.78■□□□□ 0.44
ITGA10-201ENST00000369304 PCGF6Q9BYE7 350 aa17.67■□□□□ 0.42
ITGA10-201ENST00000369304 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
ITGA10-201ENST00000369304 ZEB1P37275 1124 aaPredicted RBP17.53■□□□□ 0.4
ITGA10-201ENST00000369304 MYT1Q01538 1121 aa17.48■□□□□ 0.39
ITGA10-201ENST00000369304 CENPBP07199 599 aaPredicted RBP17.42■□□□□ 0.38
ITGA10-201ENST00000369304 EHMT2Q96KQ7 1210 aa17.37■□□□□ 0.37
ITGA10-201ENST00000369304 ABCC9O60706 1549 aa17.34■□□□□ 0.37
ITGA10-201ENST00000369304 HRCP23327 699 aa17.26■□□□□ 0.35
ITGA10-201ENST00000369304 APLP2Q06481 763 aa17.18■□□□□ 0.34
ITGA10-201ENST00000369304 FAM9AQ8IZU1 332 aaPredicted RBP17.15■□□□□ 0.34
ITGA10-201ENST00000369304 DCAF1Q9Y4B6 1507 aa17.13■□□□□ 0.33
ITGA10-201ENST00000369304 CCER1Q8TC90 406 aaPredicted RBP17.11■□□□□ 0.33
ITGA10-201ENST00000369304 TRIM26Q12899 539 aaPredicted RBP17.02■□□□□ 0.32
ITGA10-201ENST00000369304 SCRIBQ14160 1630 aa17.02■□□□□ 0.31
ITGA10-201ENST00000369304 TRIM41Q8WV44 630 aa17■□□□□ 0.31
ITGA10-201ENST00000369304 ERICH6Q7L0X2 663 aa16.93■□□□□ 0.3
ITGA10-201ENST00000369304 TTBK1Q5TCY1 1321 aaPredicted RBP16.92■□□□□ 0.3
ITGA10-201ENST00000369304 CHIC1Q5VXU3 224 aa16.92■□□□□ 0.3
ITGA10-201ENST00000369304 NACADO15069 1562 aa16.89■□□□□ 0.29
ITGA10-201ENST00000369304 RB1CC1Q8TDY2 1594 aa16.8■□□□□ 0.28
ITGA10-201ENST00000369304 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
ITGA10-201ENST00000369304 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
ITGA10-201ENST00000369304 NEFLP07196 543 aa16.73■□□□□ 0.27
ITGA10-201ENST00000369304 PPARGC1BQ86YN6 1023 aaKnown RBP16.72■□□□□ 0.27
ITGA10-201ENST00000369304 PABPN1Q86U42 306 aaKnown RBP eCLIP16.7■□□□□ 0.26
ITGA10-201ENST00000369304 UBTFP17480 764 aaKnown RBP16.61■□□□□ 0.25
ITGA10-201ENST00000369304 LOC105371045A0A1W2PR82 267 aa16.59■□□□□ 0.25
ITGA10-201ENST00000369304 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
ITGA10-201ENST00000369304 RANGAP1P46060 587 aaPredicted RBP16.48■□□□□ 0.23
ITGA10-201ENST00000369304 DIEXFQ68CQ4 756 aaKnown RBP16.45■□□□□ 0.22
ITGA10-201ENST00000369304 CECR2Q9BXF3 1484 aa16.38■□□□□ 0.21
ITGA10-201ENST00000369304 BAZ1AQ9NRL2 1556 aaPredicted RBP16.35■□□□□ 0.21
ITGA10-201ENST00000369304 GTF3C3Q9Y5Q9 886 aa16.32■□□□□ 0.2
ITGA10-201ENST00000369304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.31■□□□□ 0.2
ITGA10-201ENST00000369304 MROH2BQ7Z745 1585 aa16.28■□□□□ 0.2
ITGA10-201ENST00000369304 ATP1B4Q9UN42 357 aaPredicted RBP16.25■□□□□ 0.19
ITGA10-201ENST00000369304 ACIN1Q9UKV3 1341 aaKnown RBP16.22■□□□□ 0.19
ITGA10-201ENST00000369304 HNRNPUL2Q1KMD3 747 aaKnown RBP16.21■□□□□ 0.19
ITGA10-201ENST00000369304 WIZO95785 1651 aa16.14■□□□□ 0.17
ITGA10-201ENST00000369304 ZNF316A6NFI3 1004 aaPredicted RBP16.06■□□□□ 0.16
ITGA10-201ENST00000369304 DAXXQ9UER7 740 aaPredicted RBP16.06■□□□□ 0.16
ITGA10-201ENST00000369304 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
ITGA10-201ENST00000369304 SMARCA4P51532 1647 aa16.05■□□□□ 0.16
ITGA10-201ENST00000369304 TOP2AP11388 1531 aaKnown RBP16.04■□□□□ 0.16
ITGA10-201ENST00000369304 ITGAEP38570 1179 aa16.04■□□□□ 0.16
ITGA10-201ENST00000369304 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.15
ITGA10-201ENST00000369304 CCDC88BA6NC98 1476 aa15.99■□□□□ 0.15
ITGA10-201ENST00000369304 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
ITGA10-201ENST00000369304 CLSPNQ9HAW4 1339 aa15.96■□□□□ 0.15
ITGA10-201ENST00000369304 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
ITGA10-201ENST00000369304 SCAF1Q9H7N4 1312 aaKnown RBP15.88■□□□□ 0.13
ITGA10-201ENST00000369304 BCANQ96GW7 911 aa15.88■□□□□ 0.13
ITGA10-201ENST00000369304 WRNQ14191 1432 aaPredicted RBP eCLIP15.87■□□□□ 0.13
ITGA10-201ENST00000369304 CDK11AQ9UQ88 783 aaPredicted RBP15.85■□□□□ 0.13
ITGA10-201ENST00000369304 EEA1Q15075 1411 aa15.85■□□□□ 0.13
ITGA10-201ENST00000369304 ATAD2BQ9ULI0 1458 aa15.83■□□□□ 0.12
ITGA10-201ENST00000369304 NEUROD1Q13562 356 aa15.81■□□□□ 0.12
ITGA10-201ENST00000369304 POLR3GLQ9BT43 218 aa15.81■□□□□ 0.12
ITGA10-201ENST00000369304 ANP32CO43423 234 aa15.8■□□□□ 0.12
ITGA10-201ENST00000369304 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
ITGA10-201ENST00000369304 UNC13AQ9UPW8 1703 aa15.78■□□□□ 0.12
ITGA10-201ENST00000369304 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
ITGA10-201ENST00000369304 GOLGA3Q08378 1498 aa15.71■□□□□ 0.11
ITGA10-201ENST00000369304 FAM50AQ14320 339 aaKnown RBP15.68■□□□□ 0.1
ITGA10-201ENST00000369304 SOGA1O94964 1423 aa15.68■□□□□ 0.1
ITGA10-201ENST00000369304 TNIKQ9UKE5 1360 aa15.66■□□□□ 0.1
ITGA10-201ENST00000369304 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
ITGA10-201ENST00000369304 CEP162Q5TB80 1403 aa15.65■□□□□ 0.1
ITGA10-201ENST00000369304 MYT1LQ9UL68 1186 aa15.64■□□□□ 0.09
ITGA10-201ENST00000369304 CEP164Q9UPV0 1460 aa15.63■□□□□ 0.09
ITGA10-201ENST00000369304 EIF4G1Q04637 1599 aaKnown RBP15.6■□□□□ 0.09
ITGA10-201ENST00000369304 FKBP8Q14318 412 aa15.59■□□□□ 0.09
ITGA10-201ENST00000369304 CLIP1P30622 1438 aa15.58■□□□□ 0.08
ITGA10-201ENST00000369304 ANP32AP39687 249 aaKnown RBP15.57■□□□□ 0.08
ITGA10-201ENST00000369304 NCAPD3P42695 1498 aa15.57■□□□□ 0.08
ITGA10-201ENST00000369304 KIF27Q86VH2 1401 aa15.57■□□□□ 0.08
ITGA10-201ENST00000369304 PEG3Q9GZU2 1588 aa15.52■□□□□ 0.08
ITGA10-201ENST00000369304 TRIM52Q96A61 297 aa15.52■□□□□ 0.08
ITGA10-201ENST00000369304 MIER1Q8N108 512 aa15.48■□□□□ 0.07
ITGA10-201ENST00000369304 HMGXB3Q12766 1538 aa15.48■□□□□ 0.07
ITGA10-201ENST00000369304 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
ITGA10-201ENST00000369304 RUSC2Q8N2Y8 1516 aa15.44■□□□□ 0.06
ITGA10-201ENST00000369304 P3H3Q8IVL6 736 aa15.43■□□□□ 0.06
ITGA10-201ENST00000369304 ANP32EQ9BTT0 268 aa15.4■□□□□ 0.06
ITGA10-201ENST00000369304 CUX2O14529 1486 aa15.4■□□□□ 0.06
ITGA10-201ENST00000369304 SYNJ1O43426 1573 aa15.37■□□□□ 0.05
ITGA10-201ENST00000369304 HNRNPUQ00839 825 aaKnown RBP eCLIP15.37■□□□□ 0.05
ITGA10-201ENST00000369304 DDX10Q13206 875 aaKnown RBP15.37■□□□□ 0.05
ITGA10-201ENST00000369304 CFTRP13569 1480 aa15.33■□□□□ 0.05
ITGA10-201ENST00000369304 TONSLQ96HA7 1378 aa15.32■□□□□ 0.04
ITGA10-201ENST00000369304 CC2D2AQ9P2K1 1620 aa15.32■□□□□ 0.04
ITGA10-201ENST00000369304 CARMIL1Q5VZK9 1371 aa15.32■□□□□ 0.04
ITGA10-201ENST00000369304 RAPGEF2Q9Y4G8 1499 aa15.31■□□□□ 0.04
ITGA10-201ENST00000369304 PDS5BQ9NTI5 1447 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms