Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 AL359881.3-201ENST00000602640 1721 ntBASIC14.87□□□□□ -0.03
RAPH1Q70E73 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 KRT8P22-201ENST00000562317 1415 ntBASIC14.87□□□□□ -0.03
RAPH1Q70E73 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 SOCS2P1-201ENST00000417727 557 ntBASIC14.87□□□□□ -0.03
RAPH1Q70E73 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.87□□□□□ -0.03
RAPH1Q70E73 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 DUT-210ENST00000559935 569 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
RAPH1Q70E73 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RAPH1Q70E73 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 KLF2P2-201ENST00000416807 1039 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 AL442647.2-201ENST00000429864 857 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC007969.1-201ENST00000433675 447 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC093726.1-201ENST00000608064 963 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 AC008761.3-201ENST00000624803 892 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 PPT1-213ENST00000641319 2388 ntBASIC14.86□□□□□ -0.03
RAPH1Q70E73 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.86□□□□□ -0.03
RAPH1Q70E73 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RAPH1Q70E73 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms