Protein–RNA interactions for Protein: Q6RI45

BRWD3, Bromodomain and WD repeat-containing protein 3, humanhuman

Predictions only

Length 1,802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD3Q6RI45 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 DUT-208ENST00000559540 1441 ntTSL 2 BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 WARS-232ENST00000556645 2508 ntTSL 5 BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRWD3Q6RI45 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 PPP1R2P10-201ENST00000393023 595 ntBASIC18.19■□□□□ 0.5
BRWD3Q6RI45 AL121994.1-201ENST00000413189 402 ntBASIC18.19■□□□□ 0.5
BRWD3Q6RI45 CD37-203ENST00000426897 1204 ntTSL 2 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 HNRNPA3P12-201ENST00000437410 1063 ntBASIC18.19■□□□□ 0.5
BRWD3Q6RI45 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 ABCC6P2-201ENST00000526069 590 ntBASIC18.19■□□□□ 0.5
BRWD3Q6RI45 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 LGALS4-201ENST00000307751 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 ART3-201ENST00000341029 1517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 PDCD2-205ENST00000537445 1114 ntTSL 3 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 ECSIT-211ENST00000592312 1286 ntTSL 5 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BRWD3Q6RI45 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 FAM133B-204ENST00000445716 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 AC103724.2-201ENST00000520355 476 ntBASIC18.18■□□□□ 0.5
BRWD3Q6RI45 ALG10-202ENST00000538927 571 ntTSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRWD3Q6RI45 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 PRDX2-202ENST00000334482 784 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AL627095.1-201ENST00000414775 321 ntBASIC18.17■□□□□ 0.5
BRWD3Q6RI45 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 SFPQP1-201ENST00000446621 1786 ntBASIC18.17■□□□□ 0.5
BRWD3Q6RI45 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AC090152.1-202ENST00000518993 1079 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 TSPAN9-IT1-201ENST00000539784 562 ntTSL 4 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 GOLT1B-206ENST00000542038 933 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 C3orf84-203ENST00000545770 706 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AC008622.3-201ENST00000621170 600 ntBASIC18.17■□□□□ 0.5
BRWD3Q6RI45 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BRWD3Q6RI45 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms