Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 HLA-J-203ENST00000494367 1087 ntBASIC12.08□□□□□ -0.48
SPCS3P61009 AC069120.2-201ENST00000524091 540 ntBASIC12.08□□□□□ -0.48
SPCS3P61009 AC027369.6-201ENST00000525520 931 ntBASIC12.08□□□□□ -0.48
SPCS3P61009 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 VPS29-207ENST00000549970 818 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 SSH2-210ENST00000582084 560 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 AL671883.3-201ENST00000603274 991 ntBASIC12.08□□□□□ -0.48
SPCS3P61009 TEX48-202ENST00000612244 662 ntTSL 3 BASIC12.08□□□□□ -0.48
SPCS3P61009 AL158212.4-201ENST00000624062 1286 ntBASIC12.08□□□□□ -0.48
SPCS3P61009 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.08□□□□□ -0.48
SPCS3P61009 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC12.08□□□□□ -0.48
SPCS3P61009 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.08□□□□□ -0.48
SPCS3P61009 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SPCS3P61009 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
SPCS3P61009 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.07□□□□□ -0.48
SPCS3P61009 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 AC114501.2-201ENST00000439631 535 ntBASIC12.07□□□□□ -0.48
SPCS3P61009 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 AC125807.1-201ENST00000483097 614 ntBASIC12.07□□□□□ -0.48
SPCS3P61009 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.07□□□□□ -0.48
SPCS3P61009 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC12.07□□□□□ -0.48
SPCS3P61009 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC12.07□□□□□ -0.48
SPCS3P61009 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SPCS3P61009 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC12.07□□□□□ -0.48
SPCS3P61009 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SPCS3P61009 AL138799.1-201ENST00000448213 1675 ntBASIC12.06□□□□□ -0.48
SPCS3P61009 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.06□□□□□ -0.48
SPCS3P61009 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC12.06□□□□□ -0.48
SPCS3P61009 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SPCS3P61009 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms