Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
COL11A1P12107 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
COL11A1P12107 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.27■□□□□ 0.19
COL11A1P12107 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
COL11A1P12107 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
COL11A1P12107 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC16.27■□□□□ 0.19
COL11A1P12107 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC16.26■□□□□ 0.19
COL11A1P12107 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.26■□□□□ 0.19
COL11A1P12107 AP001057.1-201ENST00000437557 799 ntTSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 AC011471.3-201ENST00000623576 402 ntBASIC16.26■□□□□ 0.19
COL11A1P12107 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC16.26■□□□□ 0.19
COL11A1P12107 SNORD3B-1-201ENST00000577988 758 ntBASIC16.26■□□□□ 0.19
COL11A1P12107 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
COL11A1P12107 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
COL11A1P12107 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
COL11A1P12107 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 AC113367.3-201ENST00000508316 1912 ntBASIC16.26■□□□□ 0.19
COL11A1P12107 PDXDC2P-206ENST00000534700 1315 ntBASIC16.26■□□□□ 0.19
COL11A1P12107 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.26■□□□□ 0.19
COL11A1P12107 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.25■□□□□ 0.19
COL11A1P12107 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.25■□□□□ 0.19
COL11A1P12107 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.25■□□□□ 0.19
COL11A1P12107 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC16.25■□□□□ 0.19
COL11A1P12107 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 RNA5SP406-201ENST00000516106 112 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 AC013553.1-201ENST00000560906 267 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.25■□□□□ 0.19
COL11A1P12107 AC005357.2-202ENST00000590507 1060 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.25■□□□□ 0.19
COL11A1P12107 LINC00431-202ENST00000636375 159 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC16.25■□□□□ 0.19
COL11A1P12107 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 AL139158.3-201ENST00000641212 1562 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 AC012617.1-204ENST00000586340 2305 ntBASIC16.25■□□□□ 0.19
COL11A1P12107 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
COL11A1P12107 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
COL11A1P12107 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.25■□□□□ 0.19
COL11A1P12107 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC16.24■□□□□ 0.19
COL11A1P12107 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
COL11A1P12107 AC006529.1-201ENST00000459978 637 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 RN7SL818P-201ENST00000485099 259 ntBASIC16.24■□□□□ 0.19
COL11A1P12107 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.24■□□□□ 0.19
COL11A1P12107 AP003398.1-201ENST00000531124 318 ntBASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms