Protein–RNA interactions for Protein: Q7KZF4

SND1, Staphylococcal nuclease domain-containing protein 1, humanhuman

Known RBP eCLIP

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1Q7KZF4 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.342e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-207ENST00000565972 809 ntTSL 36.47□□□□□ -1.372e-6■■■■□ 23.7
SND1Q7KZF4 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.392e-6■■■■□ 23.7
SND1Q7KZF4 CD80-203ENST00000463729 737 ntTSL 1 (best)6.09□□□□□ -1.432e-6■■■■□ 23.7
SND1Q7KZF4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.532e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-209ENST00000567380 701 ntTSL 35.22□□□□□ -1.572e-6■■■■□ 23.7
SND1Q7KZF4 RAB27A-208ENST00000566877 663 ntTSL 34.81□□□□□ -1.642e-6■■■■□ 23.7
SND1Q7KZF4 CTSH-210ENST00000529861 857 ntTSL 318.4■□□□□ 0.541e-8■■■■□ 23.7
SND1Q7KZF4 CTSH-207ENST00000528741 719 ntTSL 512.91□□□□□ -0.341e-8■■■■□ 23.7
SND1Q7KZF4 CTSH-208ENST00000529263 770 ntTSL 511.96□□□□□ -0.491e-8■■■■□ 23.7
SND1Q7KZF4 ATP6V0B-209ENST00000496131 962 ntTSL 314.14□□□□□ -0.152e-9■■■■□ 23.7
SND1Q7KZF4 GGCX-204ENST00000428479 533 ntTSL 412.77□□□□□ -0.373e-8■■■■□ 23.7
SND1Q7KZF4 GGCX-202ENST00000421496 540 ntTSL 411.74□□□□□ -0.533e-8■■■■□ 23.7
SND1Q7KZF4 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.054e-7■■■■□ 23.6
SND1Q7KZF4 TM9SF4-207ENST00000495749 3023 ntTSL 210.03□□□□□ -0.82e-14■■■■□ 23.6
SND1Q7KZF4 EXT2-211ENST00000534048 520 ntTSL 36.68□□□□□ -1.349e-7■■■■□ 23.6
SND1Q7KZF4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.75e-8■■■■□ 23.6
SND1Q7KZF4 HYOU1-209ENST00000531694 2357 ntTSL 211.67□□□□□ -0.542e-8■■■■□ 23.6
SND1Q7KZF4 GLMP-208ENST00000481050 684 ntTSL 318.69■□□□□ 0.583e-7■■■■□ 23.6
SND1Q7KZF4 GLMP-209ENST00000482579 572 ntTSL 312.31□□□□□ -0.443e-7■■■■□ 23.6
SND1Q7KZF4 GPC3-203ENST00000406757 836 ntTSL 28.65□□□□□ -1.021e-68■■■■□ 23.6
SND1Q7KZF4 AMN-204ENST00000559442 470 ntTSL 220.75■□□□□ 0.913e-7■■■■□ 23.6
SND1Q7KZF4 TMBIM6-220ENST00000549966 538 ntTSL 510.56□□□□□ -0.722e-12■■■■□ 23.6
SND1Q7KZF4 ERMP1-205ENST00000487088 2799 ntTSL 523.82■■□□□ 1.46e-7■■■■□ 23.6
SND1Q7KZF4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.36e-7■■■■□ 23.6
SND1Q7KZF4 ERMP1-206ENST00000489219 3293 ntTSL 1 (best)19.72■□□□□ 0.756e-7■■■■□ 23.6
SND1Q7KZF4 ERMP1-203ENST00000462592 3554 ntTSL 218.73■□□□□ 0.596e-7■■■■□ 23.6
SND1Q7KZF4 ERMP1-201ENST00000214893 4974 ntTSL 1 (best)11□□□□□ -0.656e-7■■■■□ 23.6
SND1Q7KZF4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.616e-10■■■■□ 23.5
SND1Q7KZF4 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.451e-16■■■■□ 23.5
SND1Q7KZF4 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.57■□□□□ 0.723e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16.96■□□□□ 0.313e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.94■□□□□ 0.33e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-208ENST00000545137 2324 ntTSL 216.42■□□□□ 0.223e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC15.59■□□□□ 0.093e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-219ENST00000574439 2887 ntTSL 215.03■□□□□ -03e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.063e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.063e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-201ENST00000323940 2864 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.113e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.153e-6■■■■□ 23.5
SND1Q7KZF4 STRA6-204ENST00000423167 2776 ntTSL 1 (best) BASIC14.02□□□□□ -0.163e-6■■■■□ 23.5
SND1Q7KZF4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.282e-6■■■■□ 23.5
SND1Q7KZF4 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.042e-6■■■■□ 23.5
SND1Q7KZF4 ATP1B3-210ENST00000495216 418 ntTSL 34.15□□□□□ -1.751e-9■■■■□ 23.5
SND1Q7KZF4 TPP1-204ENST00000524611 470 ntTSL 29.57□□□□□ -0.886e-11■■■■□ 23.5
SND1Q7KZF4 LAMP2-204ENST00000486593 1069 ntTSL 58.84□□□□□ -0.991e-10■■■■□ 23.5
SND1Q7KZF4 PSAP-203ENST00000493143 576 ntTSL 212.56□□□□□ -0.43e-36■■■■□ 23.5
SND1Q7KZF4 ATP2B4-203ENST00000357681 8968 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.862e-7■■■■□ 23.5
SND1Q7KZF4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.51□□□□□ -1.052e-7■■■■□ 23.5
SND1Q7KZF4 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.42□□□□□ -1.062e-7■■■■□ 23.5
SND1Q7KZF4 HM13-223ENST00000496438 699 ntTSL 512.82□□□□□ -0.362e-8■■■■□ 23.5
SND1Q7KZF4 SERPINA1-211ENST00000553327 581 ntTSL 311.57□□□□□ -0.561e-323■■■■□ 23.5
SND1Q7KZF4 CCPG1-209ENST00000568543 721 ntTSL 35.18□□□□□ -1.587e-9■■■■□ 23.4
SND1Q7KZF4 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC30.45■■■□□ 2.463e-8■■■■□ 23.4
SND1Q7KZF4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC28.48■■■□□ 2.153e-8■■■■□ 23.4
SND1Q7KZF4 AGAP1-214ENST00000635100 2478 ntTSL 516.89■□□□□ 0.293e-8■■■■□ 23.4
SND1Q7KZF4 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.133e-8■■■■□ 23.4
SND1Q7KZF4 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.91■■□□□ 1.14e-6■■■■□ 23.4
SND1Q7KZF4 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.554e-6■■■■□ 23.4
SND1Q7KZF4 GPC1-208ENST00000469694 2862 ntTSL 215.35■□□□□ 0.054e-6■■■■□ 23.4
SND1Q7KZF4 GPC1-209ENST00000495100 3525 ntTSL 1 (best)15□□□□□ -0.014e-6■■■■□ 23.4
SND1Q7KZF4 PCYOX1-206ENST00000480949 620 ntTSL 26.85□□□□□ -1.311e-7■■■■□ 23.4
SND1Q7KZF4 HLA-C-206ENST00000470363 1279 nt11.8□□□□□ -0.529e-14■■■■□ 23.4
SND1Q7KZF4 CFB-280ENST00000482312 764 ntTSL 28.65□□□□□ -1.021e-12■■■■□ 23.4
SND1Q7KZF4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.795e-10■■■■□ 23.4
SND1Q7KZF4 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.4■□□□□ 0.541e-6■■■■□ 23.4
SND1Q7KZF4 TMED1-203ENST00000588259 616 ntTSL 517.46■□□□□ 0.391e-6■■■■□ 23.4
SND1Q7KZF4 TMED1-206ENST00000591157 717 ntTSL 517.11■□□□□ 0.331e-6■■■■□ 23.4
SND1Q7KZF4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.211e-6■■■■□ 23.4
SND1Q7KZF4 TMED1-202ENST00000586835 713 ntTSL 214.51□□□□□ -0.091e-6■■■■□ 23.4
SND1Q7KZF4 TMED1-204ENST00000588289 541 ntTSL 2 BASIC13.31□□□□□ -0.281e-6■■■■□ 23.4
SND1Q7KZF4 ASNS-215ENST00000462436 698 ntTSL 213.38□□□□□ -0.271e-14■■■■□ 23.4
SND1Q7KZF4 TGFBI-201ENST00000442011 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.178e-10■■■■□ 23.3
SND1Q7KZF4 TGFBI-206ENST00000507018 2469 ntTSL 513.73□□□□□ -0.218e-10■■■■□ 23.3
SND1Q7KZF4 TGFBI-205ENST00000506699 3159 ntTSL 213.07□□□□□ -0.328e-10■■■■□ 23.3
SND1Q7KZF4 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.36e-7■■■■□ 23.3
SND1Q7KZF4 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.276e-7■■■■□ 23.3
SND1Q7KZF4 HMGCS1-203ENST00000507004 950 ntTSL 214.9□□□□□ -0.022e-6■■■■□ 23.3
SND1Q7KZF4 HMGCS1-204ENST00000507293 708 ntTSL 1 (best)11.9□□□□□ -0.52e-6■■■■□ 23.3
SND1Q7KZF4 ERLIN2-204ENST00000518526 663 ntTSL 311.86□□□□□ -0.514e-7■■■■□ 23.3
SND1Q7KZF4 TSPAN7-207ENST00000488893 736 ntTSL 56.15□□□□□ -1.428e-8■■■■□ 23.3
SND1Q7KZF4 SSR2-217ENST00000531917 555 ntTSL 515.4■□□□□ 0.061e-10■■■■□ 23.3
SND1Q7KZF4 SSR2-206ENST00000472898 711 ntTSL 210.88□□□□□ -0.671e-10■■■■□ 23.3
SND1Q7KZF4 SSR2-203ENST00000466905 666 ntTSL 59.43□□□□□ -0.91e-10■■■■□ 23.3
SND1Q7KZF4 SSR2-202ENST00000368311 5166 ntTSL 1 (best)9.24□□□□□ -0.931e-10■■■■□ 23.3
SND1Q7KZF4 SSR2-208ENST00000474377 639 ntTSL 59.06□□□□□ -0.961e-10■■■■□ 23.3
SND1Q7KZF4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.711e-6■■■■□ 23.3
SND1Q7KZF4 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.93■□□□□ 0.621e-6■■■■□ 23.3
SND1Q7KZF4 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC14.04□□□□□ -0.161e-6■■■■□ 23.3
SND1Q7KZF4 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.371e-6■■■■□ 23.3
SND1Q7KZF4 A2M-206ENST00000495442 729 ntTSL 313.89□□□□□ -0.191e-323■■■■□ 23.3
SND1Q7KZF4 A2M-207ENST00000495709 509 ntTSL 26.38□□□□□ -1.391e-323■■■■□ 23.3
SND1Q7KZF4 CD53-205ENST00000497404 917 ntTSL 55.6□□□□□ -1.515e-9■■■■□ 23.3
SND1Q7KZF4 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.283e-6■■■■□ 23.2
SND1Q7KZF4 OCLN-201ENST00000355237 6438 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.413e-6■■■■□ 23.2
SND1Q7KZF4 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC8.77□□□□□ -1.013e-6■■■■□ 23.2
SND1Q7KZF4 DHCR7-206ENST00000527316 1005 ntTSL 522.3■■□□□ 1.168e-12■■■■□ 23.2
SND1Q7KZF4 SCARB1-209ENST00000545305 851 ntTSL 214.38□□□□□ -0.111e-9■■■■□ 23.2
SND1Q7KZF4 RPN2-203ENST00000373632 1073 ntTSL 513.5□□□□□ -0.253e-23■■■■□ 23.2
SND1Q7KZF4 RPN2-205ENST00000456102 791 ntTSL 37.08□□□□□ -1.283e-23■■■■□ 23.2
Retrieved 100 of 13,567 protein–RNA pairs in 84.6 ms