RNA–Protein interactions for RNA: ENST00000545137.5

STRA6-208, Transcript of stimulated by retinoic acid 6, humanhuman

TSL 2

Gene STRA6, Length 2,324 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRA6-208ENST00000545137 NISCHQ9Y2I1 1504 aa26.63■■□□□ 1.85
STRA6-208ENST00000545137 PELP1Q8IZL8 1130 aaKnown RBP25.61■■□□□ 1.69
STRA6-208ENST00000545137 HRCP23327 699 aa24.98■■□□□ 1.59
STRA6-208ENST00000545137 MYT1Q01538 1121 aa24.96■■□□□ 1.59
STRA6-208ENST00000545137 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
STRA6-208ENST00000545137 SCAF1Q9H7N4 1312 aaKnown RBP24.07■■□□□ 1.44
STRA6-208ENST00000545137 PCGF6Q9BYE7 350 aa23.92■■□□□ 1.42
STRA6-208ENST00000545137 TTBK1Q5TCY1 1321 aaPredicted RBP23.74■■□□□ 1.39
STRA6-208ENST00000545137 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
STRA6-208ENST00000545137 ACIN1Q9UKV3 1341 aaKnown RBP23.27■■□□□ 1.32
STRA6-208ENST00000545137 ZEB1P37275 1124 aaPredicted RBP23.25■■□□□ 1.31
STRA6-208ENST00000545137 DCAF1Q9Y4B6 1507 aa23.22■■□□□ 1.31
STRA6-208ENST00000545137 CCDC180Q9P1Z9 1646 aa23.14■■□□□ 1.29
STRA6-208ENST00000545137 NEUROD1Q13562 356 aa23.08■■□□□ 1.28
STRA6-208ENST00000545137 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
STRA6-208ENST00000545137 TRIM26Q12899 539 aaPredicted RBP23.04■■□□□ 1.28
STRA6-208ENST00000545137 BCL11AQ9H165 835 aa23■■□□□ 1.27
STRA6-208ENST00000545137 CENPBP07199 599 aaPredicted RBP22.97■■□□□ 1.27
STRA6-208ENST00000545137 CHIC1Q5VXU3 224 aa22.93■■□□□ 1.26
STRA6-208ENST00000545137 ABCC9O60706 1549 aa22.89■■□□□ 1.26
STRA6-208ENST00000545137 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.26
STRA6-208ENST00000545137 SUPT5HO00267 1087 aaKnown RBP22.89■■□□□ 1.25
STRA6-208ENST00000545137 PRKCSHP14314 528 aaPredicted RBP22.79■■□□□ 1.24
STRA6-208ENST00000545137 FAM9AQ8IZU1 332 aaPredicted RBP22.76■■□□□ 1.23
STRA6-208ENST00000545137 ZCCHC6Q5VYS8 1495 aaKnown RBP22.53■■□□□ 1.2
STRA6-208ENST00000545137 ANP32EQ9BTT0 268 aa22.47■■□□□ 1.19
STRA6-208ENST00000545137 ERICH6Q7L0X2 663 aa22.43■■□□□ 1.18
STRA6-208ENST00000545137 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.17
STRA6-208ENST00000545137 DIEXFQ68CQ4 756 aaKnown RBP22.36■■□□□ 1.17
STRA6-208ENST00000545137 DCAF8L2P0C7V8 631 aa22.23■■□□□ 1.15
STRA6-208ENST00000545137 APLP2Q06481 763 aa22.17■■□□□ 1.14
STRA6-208ENST00000545137 CSRNP3Q8WYN3 585 aa22.17■■□□□ 1.14
STRA6-208ENST00000545137 YTHDC1Q96MU7 727 aaKnown RBP21.99■■□□□ 1.11
STRA6-208ENST00000545137 TRIM41Q8WV44 630 aa21.94■■□□□ 1.1
STRA6-208ENST00000545137 TSHZ2Q9NRE2 1034 aa21.91■■□□□ 1.1
STRA6-208ENST00000545137 CLSPNQ9HAW4 1339 aa21.91■■□□□ 1.1
STRA6-208ENST00000545137 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
STRA6-208ENST00000545137 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.84■■□□□ 1.09
STRA6-208ENST00000545137 RB1CC1Q8TDY2 1594 aa21.81■■□□□ 1.08
STRA6-208ENST00000545137 SUPT16HQ9Y5B9 1047 aaKnown RBP21.77■■□□□ 1.08
STRA6-208ENST00000545137 ZNF316A6NFI3 1004 aaPredicted RBP21.74■■□□□ 1.07
STRA6-208ENST00000545137 NACADO15069 1562 aa21.68■■□□□ 1.06
STRA6-208ENST00000545137 MIER1Q8N108 512 aa21.64■■□□□ 1.06
STRA6-208ENST00000545137 DNAJC5BQ9UF47 199 aa21.51■■□□□ 1.03
STRA6-208ENST00000545137 ANO8Q9HCE9 1232 aaPredicted RBP21.41■■□□□ 1.02
STRA6-208ENST00000545137 SCRIBQ14160 1630 aa21.35■■□□□ 1.01
STRA6-208ENST00000545137 MYT1LQ9UL68 1186 aa21.32■■□□□ 1
STRA6-208ENST00000545137 RBM19Q9Y4C8 960 aaKnown RBP21.32■■□□□ 1
STRA6-208ENST00000545137 PABPN1Q86U42 306 aaKnown RBP eCLIP21.31■■□□□ 1
STRA6-208ENST00000545137 UNC13AQ9UPW8 1703 aa21.23■□□□□ 0.99
STRA6-208ENST00000545137 UBE2Q2Q8WVN8 375 aa21.22■□□□□ 0.99
STRA6-208ENST00000545137 MSH5O43196 834 aa21.18■□□□□ 0.98
STRA6-208ENST00000545137 BICRAQ9NZM4 1560 aa21.16■□□□□ 0.98
STRA6-208ENST00000545137 ERICH6BQ5W0A0 696 aa21.15■□□□□ 0.98
STRA6-208ENST00000545137 DEKP35659 375 aaKnown RBP21.12■□□□□ 0.97
STRA6-208ENST00000545137 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
STRA6-208ENST00000545137 SALL2Q9Y467 1007 aaPredicted RBP21.1■□□□□ 0.97
STRA6-208ENST00000545137 BCANQ96GW7 911 aa21.06■□□□□ 0.96
STRA6-208ENST00000545137 FANCIQ9NVI1 1328 aa21.04■□□□□ 0.96
STRA6-208ENST00000545137 EHMT2Q96KQ7 1210 aa20.99■□□□□ 0.95
STRA6-208ENST00000545137 FKBP8Q14318 412 aa20.96■□□□□ 0.95
STRA6-208ENST00000545137 CCDC136Q96JN2 1154 aa20.94■□□□□ 0.94
STRA6-208ENST00000545137 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
STRA6-208ENST00000545137 EIF5BO60841 1220 aaKnown RBP20.87■□□□□ 0.93
STRA6-208ENST00000545137 NEFLP07196 543 aa20.83■□□□□ 0.92
STRA6-208ENST00000545137 WRNQ14191 1432 aaPredicted RBP eCLIP20.82■□□□□ 0.92
STRA6-208ENST00000545137 MROH2BQ7Z745 1585 aa20.79■□□□□ 0.92
STRA6-208ENST00000545137 ITGAEP38570 1179 aa20.75■□□□□ 0.91
STRA6-208ENST00000545137 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
STRA6-208ENST00000545137 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.71■□□□□ 0.91
STRA6-208ENST00000545137 WIZO95785 1651 aa20.68■□□□□ 0.9
STRA6-208ENST00000545137 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
STRA6-208ENST00000545137 PKNOX2Q96KN3 472 aa20.67■□□□□ 0.9
STRA6-208ENST00000545137 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
STRA6-208ENST00000545137 CDK11AQ9UQ88 783 aaPredicted RBP20.65■□□□□ 0.9
STRA6-208ENST00000545137 IL27Q8NEV9 243 aa20.62■□□□□ 0.89
STRA6-208ENST00000545137 NBR1Q14596 966 aa20.56■□□□□ 0.88
STRA6-208ENST00000545137 KCNH8Q96L42 1107 aa20.55■□□□□ 0.88
STRA6-208ENST00000545137 RTN4Q9NQC3 1192 aaKnown RBP20.55■□□□□ 0.88
STRA6-208ENST00000545137 NOP58Q9Y2X3 529 aaKnown RBP20.52■□□□□ 0.88
STRA6-208ENST00000545137 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
STRA6-208ENST00000545137 DAXXQ9UER7 740 aaPredicted RBP20.47■□□□□ 0.87
STRA6-208ENST00000545137 HNRNPUL2Q1KMD3 747 aaKnown RBP20.47■□□□□ 0.87
STRA6-208ENST00000545137 BAZ1AQ9NRL2 1556 aaPredicted RBP20.46■□□□□ 0.87
STRA6-208ENST00000545137 CEP162Q5TB80 1403 aa20.45■□□□□ 0.86
STRA6-208ENST00000545137 PAK3O75914 559 aaPredicted RBP20.35■□□□□ 0.85
STRA6-208ENST00000545137 PLEKHG5O94827 1062 aa20.32■□□□□ 0.84
STRA6-208ENST00000545137 PODXL2Q9NZ53 605 aa20.32■□□□□ 0.84
STRA6-208ENST00000545137 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
STRA6-208ENST00000545137 C11orf95C9JLR9 678 aaPredicted RBP20.29■□□□□ 0.84
STRA6-208ENST00000545137 TRIM52Q96A61 297 aa20.27■□□□□ 0.84
STRA6-208ENST00000545137 TOP2AP11388 1531 aaKnown RBP20.27■□□□□ 0.83
STRA6-208ENST00000545137 TNIKQ9UKE5 1360 aa20.25■□□□□ 0.83
STRA6-208ENST00000545137 ABCC8Q09428 1581 aa20.25■□□□□ 0.83
STRA6-208ENST00000545137 DHX57Q6P158 1386 aaKnown RBP20.25■□□□□ 0.83
STRA6-208ENST00000545137 CCDC88BA6NC98 1476 aa20.24■□□□□ 0.83
STRA6-208ENST00000545137 WASHC2AQ641Q2 1341 aa20.23■□□□□ 0.83
STRA6-208ENST00000545137 GLIPR1L2Q4G1C9 344 aa20.22■□□□□ 0.83
STRA6-208ENST00000545137 SMARCA2P51531 1590 aa20.2■□□□□ 0.82
STRA6-208ENST00000545137 CCER2I3L3R5 266 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms