RNA–Protein interactions for RNA: ENST00000553327.5

SERPINA1-211, Transcript of serpin family A member 1, humanhuman

TSL 3

Gene SERPINA1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERPINA1-211ENST00000553327 NISCHQ9Y2I1 1504 aa28.64■■■□□ 2.17
SERPINA1-211ENST00000553327 ABCC9O60706 1549 aa27.85■■■□□ 2.05
SERPINA1-211ENST00000553327 DNAJC5BQ9UF47 199 aa27.36■■□□□ 1.97
SERPINA1-211ENST00000553327 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
SERPINA1-211ENST00000553327 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
SERPINA1-211ENST00000553327 RB1CC1Q8TDY2 1594 aa25.79■■□□□ 1.72
SERPINA1-211ENST00000553327 PABPN1Q86U42 306 aaKnown RBP eCLIP25.65■■□□□ 1.7
SERPINA1-211ENST00000553327 UNC13AQ9UPW8 1703 aa25.34■■□□□ 1.65
SERPINA1-211ENST00000553327 NACADO15069 1562 aa25.22■■□□□ 1.63
SERPINA1-211ENST00000553327 CECR2Q9BXF3 1484 aa25.19■■□□□ 1.62
SERPINA1-211ENST00000553327 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
SERPINA1-211ENST00000553327 CC2D2AQ9P2K1 1620 aa25.08■■□□□ 1.6
SERPINA1-211ENST00000553327 DCAF8L2P0C7V8 631 aa24.82■■□□□ 1.56
SERPINA1-211ENST00000553327 EIF4G1Q04637 1599 aaKnown RBP24.64■■□□□ 1.54
SERPINA1-211ENST00000553327 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
SERPINA1-211ENST00000553327 CUX2O14529 1486 aa24.51■■□□□ 1.51
SERPINA1-211ENST00000553327 TRIM41Q8WV44 630 aa24.5■■□□□ 1.51
SERPINA1-211ENST00000553327 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
SERPINA1-211ENST00000553327 ERCC6Q03468 1493 aa24.12■■□□□ 1.45
SERPINA1-211ENST00000553327 SCRIBQ14160 1630 aa24.03■■□□□ 1.44
SERPINA1-211ENST00000553327 ZCCHC6Q5VYS8 1495 aaKnown RBP23.61■■□□□ 1.37
SERPINA1-211ENST00000553327 THOC2Q8NI27 1593 aaKnown RBP23.59■■□□□ 1.37
SERPINA1-211ENST00000553327 NESP48681 1621 aa23.51■■□□□ 1.35
SERPINA1-211ENST00000553327 DCAF1Q9Y4B6 1507 aa23.49■■□□□ 1.35
SERPINA1-211ENST00000553327 AEBP2Q6ZN18 517 aaPredicted RBP23.35■■□□□ 1.33
SERPINA1-211ENST00000553327 SMARCA2P51531 1590 aa23.35■■□□□ 1.33
SERPINA1-211ENST00000553327 NCAPD3P42695 1498 aa23.27■■□□□ 1.32
SERPINA1-211ENST00000553327 BAZ1AQ9NRL2 1556 aaPredicted RBP23.27■■□□□ 1.32
SERPINA1-211ENST00000553327 KIF21AQ7Z4S6 1674 aa23.22■■□□□ 1.31
SERPINA1-211ENST00000553327 RIMBP3CA6NJZ7 1639 aa23.11■■□□□ 1.29
SERPINA1-211ENST00000553327 RIMBP3BA6NNM3 1639 aa23.11■■□□□ 1.29
SERPINA1-211ENST00000553327 RIMBP3Q9UFD9 1639 aa23.11■■□□□ 1.29
SERPINA1-211ENST00000553327 OSCARQ8IYS5 282 aa23.08■■□□□ 1.29
SERPINA1-211ENST00000553327 ATAD2BQ9ULI0 1458 aa23.05■■□□□ 1.28
SERPINA1-211ENST00000553327 LAMC3Q9Y6N6 1575 aa23.04■■□□□ 1.28
SERPINA1-211ENST00000553327 HMGXB3Q12766 1538 aa23.03■■□□□ 1.28
SERPINA1-211ENST00000553327 TRHP20396 242 aaPredicted RBP22.96■■□□□ 1.27
SERPINA1-211ENST00000553327 PDS5BQ9NTI5 1447 aa22.91■■□□□ 1.26
SERPINA1-211ENST00000553327 WDR62O43379 1518 aa22.87■■□□□ 1.25
SERPINA1-211ENST00000553327 MRC2Q9UBG0 1479 aa22.86■■□□□ 1.25
SERPINA1-211ENST00000553327 ARHGEF11O15085 1522 aa22.85■■□□□ 1.25
SERPINA1-211ENST00000553327 BAZ1BQ9UIG0 1483 aaKnown RBP22.77■■□□□ 1.24
SERPINA1-211ENST00000553327 SMARCA4P51532 1647 aa22.71■■□□□ 1.23
SERPINA1-211ENST00000553327 CYB5RLQ6IPT4 315 aa22.71■■□□□ 1.23
SERPINA1-211ENST00000553327 ILDR1Q86SU0 546 aaPredicted RBP22.67■■□□□ 1.22
SERPINA1-211ENST00000553327 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
SERPINA1-211ENST00000553327 CADPSQ9ULU8 1353 aa22.5■■□□□ 1.19
SERPINA1-211ENST00000553327 CEP164Q9UPV0 1460 aa22.48■■□□□ 1.19
SERPINA1-211ENST00000553327 PEG3Q9GZU2 1588 aa22.42■■□□□ 1.18
SERPINA1-211ENST00000553327 FANCD2Q9BXW9 1451 aa22.32■■□□□ 1.16
SERPINA1-211ENST00000553327 URB2Q14146 1524 aaKnown RBP22.26■■□□□ 1.15
SERPINA1-211ENST00000553327 ZNF608Q9ULD9 1512 aaPredicted RBP22.24■■□□□ 1.15
SERPINA1-211ENST00000553327 CHD1O14646 1710 aa22.23■■□□□ 1.15
SERPINA1-211ENST00000553327 RSF1Q96T23 1441 aaPredicted RBP22.16■■□□□ 1.14
SERPINA1-211ENST00000553327 MROH2BQ7Z745 1585 aa22.1■■□□□ 1.13
SERPINA1-211ENST00000553327 EIF4G3O43432 1585 aaKnown RBP22.08■■□□□ 1.12
SERPINA1-211ENST00000553327 IFT140Q96RY7 1462 aa22.04■■□□□ 1.12
SERPINA1-211ENST00000553327 FBLN2P98095 1184 aa21.96■■□□□ 1.11
SERPINA1-211ENST00000553327 CFTRP13569 1480 aa21.96■■□□□ 1.11
SERPINA1-211ENST00000553327 CLASP1Q7Z460 1538 aa21.85■■□□□ 1.09
SERPINA1-211ENST00000553327 AQRO60306 1485 aaKnown RBP eCLIP21.82■■□□□ 1.083e-14■■■■■ 33.4
SERPINA1-211ENST00000553327 WIZO95785 1651 aa21.82■■□□□ 1.08
SERPINA1-211ENST00000553327 KDM4FA0A1W2PPD8 638 aa21.81■■□□□ 1.08
SERPINA1-211ENST00000553327 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
SERPINA1-211ENST00000553327 TOPBP1Q92547 1522 aa21.74■■□□□ 1.07
SERPINA1-211ENST00000553327 GAPVD1Q14C86 1478 aa21.72■■□□□ 1.07
SERPINA1-211ENST00000553327 KIF13AQ9H1H9 1805 aa21.71■■□□□ 1.07
SERPINA1-211ENST00000553327 SYNJ1O43426 1573 aa21.68■■□□□ 1.06
SERPINA1-211ENST00000553327 TARBP1Q13395 1621 aaKnown RBP21.68■■□□□ 1.06
SERPINA1-211ENST00000553327 ERCC6L2Q5T890 1561 aa21.62■■□□□ 1.05
SERPINA1-211ENST00000553327 SNAPC4Q5SXM2 1469 aa21.58■■□□□ 1.05
SERPINA1-211ENST00000553327 HECW2Q9P2P5 1572 aa21.57■■□□□ 1.04
SERPINA1-211ENST00000553327 DNMBPQ6XZF7 1577 aa21.53■■□□□ 1.04
SERPINA1-211ENST00000553327 FBXO41Q8TF61 875 aa21.51■■□□□ 1.03
SERPINA1-211ENST00000553327 CHMP7Q8WUX9 453 aaPredicted RBP21.49■■□□□ 1.03
SERPINA1-211ENST00000553327 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
SERPINA1-211ENST00000553327 LMTK3Q96Q04 1460 aa21.48■■□□□ 1.03
SERPINA1-211ENST00000553327 KDM6BO15054 1643 aa21.46■■□□□ 1.03
SERPINA1-211ENST00000553327 TDRD9Q8NDG6 1382 aaKnown RBP21.44■■□□□ 1.02
SERPINA1-211ENST00000553327 POLA1P09884 1462 aaPredicted RBP21.43■■□□□ 1.02
SERPINA1-211ENST00000553327 RAD54L2Q9Y4B4 1467 aa21.4■■□□□ 1.02
SERPINA1-211ENST00000553327 MAGI1Q96QZ7 1491 aaPredicted RBP21.39■■□□□ 1.01
SERPINA1-211ENST00000553327 TOP2AP11388 1531 aaKnown RBP21.38■■□□□ 1.01
SERPINA1-211ENST00000553327 SYNJ2O15056 1496 aa21.35■■□□□ 1.01
SERPINA1-211ENST00000553327 ADGRL1O94910 1474 aa21.35■■□□□ 1.01
SERPINA1-211ENST00000553327 FAM69CQ0P6D2 419 aa21.3■■□□□ 1
SERPINA1-211ENST00000553327 WDR97A6NE52 1622 aa21.27■■□□□ 1
SERPINA1-211ENST00000553327 SOCS7O14512 581 aa21.27■■□□□ 1
SERPINA1-211ENST00000553327 ABCC10Q5T3U5 1492 aa21.26■□□□□ 0.99
SERPINA1-211ENST00000553327 TSPOAP1O95153 1857 aa21.26■□□□□ 0.99
SERPINA1-211ENST00000553327 DIP2BQ9P265 1576 aa21.25■□□□□ 0.99
SERPINA1-211ENST00000553327 SOGA1O94964 1423 aa21.24■□□□□ 0.99
SERPINA1-211ENST00000553327 GRIN2BQ13224 1484 aa21.24■□□□□ 0.99
SERPINA1-211ENST00000553327 ILDR2Q71H61 639 aa21.23■□□□□ 0.99
SERPINA1-211ENST00000553327 CEP170Q5SW79 1584 aa21.23■□□□□ 0.99
SERPINA1-211ENST00000553327 PBRM1Q86U86 1689 aa21.19■□□□□ 0.98
SERPINA1-211ENST00000553327 CCDC88BA6NC98 1476 aa21.16■□□□□ 0.98
SERPINA1-211ENST00000553327 FGD5Q6ZNL6 1462 aa21.1■□□□□ 0.97
SERPINA1-211ENST00000553327 MAPKBP1O60336 1514 aa21.09■□□□□ 0.97
SERPINA1-211ENST00000553327 SHROOM2Q13796 1616 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms