RNA–Protein interactions for RNA: ENST00000428479.3

GGCX-204, Transcript of gamma-glutamyl carboxylase, humanhuman

TSL 4

Gene GGCX, Length 533 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGCX-204ENST00000428479 NISCHQ9Y2I1 1504 aa29.72■■■□□ 2.35
GGCX-204ENST00000428479 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
GGCX-204ENST00000428479 ABCC9O60706 1549 aa25.64■■□□□ 1.7
GGCX-204ENST00000428479 ZCCHC6Q5VYS8 1495 aaKnown RBP24.78■■□□□ 1.56
GGCX-204ENST00000428479 NACADO15069 1562 aa24.74■■□□□ 1.55
GGCX-204ENST00000428479 RB1CC1Q8TDY2 1594 aa24.74■■□□□ 1.55
GGCX-204ENST00000428479 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
GGCX-204ENST00000428479 MYO15BQ96JP2 1530 aa24.65■■□□□ 1.54
GGCX-204ENST00000428479 DCAF1Q9Y4B6 1507 aa24.61■■□□□ 1.53
GGCX-204ENST00000428479 UNC13AQ9UPW8 1703 aa24.23■■□□□ 1.47
GGCX-204ENST00000428479 SCRIBQ14160 1630 aa24.06■■□□□ 1.44
GGCX-204ENST00000428479 BICRAQ9NZM4 1560 aa24.01■■□□□ 1.43
GGCX-204ENST00000428479 PABPN1Q86U42 306 aaKnown RBP eCLIP23.97■■□□□ 1.43
GGCX-204ENST00000428479 SHROOM4Q9ULL8 1493 aa23.74■■□□□ 1.39
GGCX-204ENST00000428479 DNAJC5BQ9UF47 199 aa23.4■■□□□ 1.34
GGCX-204ENST00000428479 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
GGCX-204ENST00000428479 CC2D2AQ9P2K1 1620 aa23.21■■□□□ 1.31
GGCX-204ENST00000428479 CECR2Q9BXF3 1484 aa23.14■■□□□ 1.29
GGCX-204ENST00000428479 SMARCA4P51532 1647 aa23.04■■□□□ 1.28
GGCX-204ENST00000428479 BAZ1AQ9NRL2 1556 aaPredicted RBP23.02■■□□□ 1.28
GGCX-204ENST00000428479 MROH2BQ7Z745 1585 aa22.92■■□□□ 1.26
GGCX-204ENST00000428479 ATAD2BQ9ULI0 1458 aa22.85■■□□□ 1.25
GGCX-204ENST00000428479 SMARCA2P51531 1590 aa22.84■■□□□ 1.25
GGCX-204ENST00000428479 NCAPD3P42695 1498 aa22.83■■□□□ 1.25
GGCX-204ENST00000428479 PEG3Q9GZU2 1588 aa22.81■■□□□ 1.24
GGCX-204ENST00000428479 HMGXB3Q12766 1538 aa22.73■■□□□ 1.23
GGCX-204ENST00000428479 RSF1Q96T23 1441 aaPredicted RBP22.7■■□□□ 1.22
GGCX-204ENST00000428479 WIZO95785 1651 aa22.69■■□□□ 1.22
GGCX-204ENST00000428479 BAZ1BQ9UIG0 1483 aaKnown RBP22.67■■□□□ 1.22
GGCX-204ENST00000428479 TOP2AP11388 1531 aaKnown RBP22.43■■□□□ 1.18
GGCX-204ENST00000428479 NESP48681 1621 aa22.24■■□□□ 1.15
GGCX-204ENST00000428479 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
GGCX-204ENST00000428479 LAMC3Q9Y6N6 1575 aa22.21■■□□□ 1.15
GGCX-204ENST00000428479 CCDC88BA6NC98 1476 aa22.17■■□□□ 1.14
GGCX-204ENST00000428479 CADPSQ9ULU8 1353 aa22.16■■□□□ 1.14
GGCX-204ENST00000428479 CFTRP13569 1480 aa22.07■■□□□ 1.12
GGCX-204ENST00000428479 ERCC6Q03468 1493 aa22.07■■□□□ 1.12
GGCX-204ENST00000428479 PDS5BQ9NTI5 1447 aa22.03■■□□□ 1.12
GGCX-204ENST00000428479 KIF21AQ7Z4S6 1674 aa22.01■■□□□ 1.11
GGCX-204ENST00000428479 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
GGCX-204ENST00000428479 FANCD2Q9BXW9 1451 aa21.91■■□□□ 1.1
GGCX-204ENST00000428479 THOC2Q8NI27 1593 aaKnown RBP21.88■■□□□ 1.09
GGCX-204ENST00000428479 CEP164Q9UPV0 1460 aa21.86■■□□□ 1.09
GGCX-204ENST00000428479 MRC2Q9UBG0 1479 aa21.8■■□□□ 1.08
GGCX-204ENST00000428479 CUX2O14529 1486 aa21.79■■□□□ 1.08
GGCX-204ENST00000428479 WDR62O43379 1518 aa21.74■■□□□ 1.07
GGCX-204ENST00000428479 URB2Q14146 1524 aaKnown RBP21.7■■□□□ 1.06
GGCX-204ENST00000428479 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
GGCX-204ENST00000428479 ABCC8Q09428 1581 aa21.58■■□□□ 1.05
GGCX-204ENST00000428479 DNMBPQ6XZF7 1577 aa21.58■■□□□ 1.05
GGCX-204ENST00000428479 CUX1P39880 1505 aa21.49■■□□□ 1.03
GGCX-204ENST00000428479 POLA1P09884 1462 aaPredicted RBP21.41■■□□□ 1.02
GGCX-204ENST00000428479 IFT140Q96RY7 1462 aa21.39■■□□□ 1.02
GGCX-204ENST00000428479 WRNQ14191 1432 aaPredicted RBP eCLIP21.38■■□□□ 1.01
GGCX-204ENST00000428479 FGD5Q6ZNL6 1462 aa21.38■■□□□ 1.01
GGCX-204ENST00000428479 TARBP1Q13395 1621 aaKnown RBP21.37■■□□□ 1.01
GGCX-204ENST00000428479 BIVM-ERCC5R4GMW8 1640 aa21.36■■□□□ 1.01
GGCX-204ENST00000428479 TOP2BQ02880 1626 aa21.35■■□□□ 1.01
GGCX-204ENST00000428479 SYNJ1O43426 1573 aa21.35■■□□□ 1.01
GGCX-204ENST00000428479 RAD54L2Q9Y4B4 1467 aa21.32■■□□□ 1
GGCX-204ENST00000428479 SOGA1O94964 1423 aa21.31■■□□□ 1
GGCX-204ENST00000428479 ZNF608Q9ULD9 1512 aaPredicted RBP21.3■■□□□ 1
GGCX-204ENST00000428479 EIF4G3O43432 1585 aaKnown RBP21.23■□□□□ 0.99
GGCX-204ENST00000428479 WDR97A6NE52 1622 aa21.23■□□□□ 0.99
GGCX-204ENST00000428479 AQRO60306 1485 aaKnown RBP eCLIP21.2■□□□□ 0.98
GGCX-204ENST00000428479 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
GGCX-204ENST00000428479 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
GGCX-204ENST00000428479 ABCA5Q8WWZ7 1642 aa21.1■□□□□ 0.97
GGCX-204ENST00000428479 GAPVD1Q14C86 1478 aa21.07■□□□□ 0.96
GGCX-204ENST00000428479 PBRM1Q86U86 1689 aa21.05■□□□□ 0.96
GGCX-204ENST00000428479 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
GGCX-204ENST00000428479 SNAPC4Q5SXM2 1469 aa21■□□□□ 0.95
GGCX-204ENST00000428479 MAGI1Q96QZ7 1491 aaPredicted RBP20.98■□□□□ 0.95
GGCX-204ENST00000428479 CHD1O14646 1710 aa20.96■□□□□ 0.95
GGCX-204ENST00000428479 TRIM41Q8WV44 630 aa20.96■□□□□ 0.95
GGCX-204ENST00000428479 DNAJC5Q9H3Z4 198 aa20.95■□□□□ 0.94
GGCX-204ENST00000428479 ERICH3Q5RHP9 1530 aa20.93■□□□□ 0.94
GGCX-204ENST00000428479 KIF27Q86VH2 1401 aa20.92■□□□□ 0.94
GGCX-204ENST00000428479 OSCARQ8IYS5 282 aa20.91■□□□□ 0.94
GGCX-204ENST00000428479 SYNJ2O15056 1496 aa20.9■□□□□ 0.94
GGCX-204ENST00000428479 FBLN2P98095 1184 aa20.89■□□□□ 0.93
GGCX-204ENST00000428479 ADAMTS12P58397 1594 aa20.87■□□□□ 0.93
GGCX-204ENST00000428479 CHMP7Q8WUX9 453 aaPredicted RBP20.86■□□□□ 0.93
GGCX-204ENST00000428479 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
GGCX-204ENST00000428479 FHAD1B1AJZ9 1412 aa20.83■□□□□ 0.93
GGCX-204ENST00000428479 IGF1RP08069 1367 aa20.83■□□□□ 0.92
GGCX-204ENST00000428479 RUSC2Q8N2Y8 1516 aa20.81■□□□□ 0.92
GGCX-204ENST00000428479 GRIN2AQ12879 1464 aa20.79■□□□□ 0.92
GGCX-204ENST00000428479 CUL7Q14999 1698 aa20.78■□□□□ 0.92
GGCX-204ENST00000428479 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
GGCX-204ENST00000428479 CARMIL1Q5VZK9 1371 aa20.7■□□□□ 0.9
GGCX-204ENST00000428479 NUP160Q12769 1436 aa20.69■□□□□ 0.9
GGCX-204ENST00000428479 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
GGCX-204ENST00000428479 EEA1Q15075 1411 aa20.61■□□□□ 0.89
GGCX-204ENST00000428479 RAPGEF2Q9Y4G8 1499 aa20.6■□□□□ 0.89
GGCX-204ENST00000428479 ARHGEF11O15085 1522 aa20.59■□□□□ 0.89
GGCX-204ENST00000428479 RIMBP3CA6NJZ7 1639 aa20.59■□□□□ 0.89
GGCX-204ENST00000428479 RIMBP3BA6NNM3 1639 aa20.59■□□□□ 0.89
GGCX-204ENST00000428479 RIMBP3Q9UFD9 1639 aa20.59■□□□□ 0.89
GGCX-204ENST00000428479 CSRNP3Q8WYN3 585 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 189.1 ms