Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 PLA2G2A-204ENST00000469162 871 ntTSL 315.54■□□□□ 0.085e-13■■■■□ 25.9
LARP4Q71RC2 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.09□□□□□ -0.152e-6■■■■□ 25.9
LARP4Q71RC2 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.545e-13■■■■□ 25.9
LARP4Q71RC2 ATP2B2-202ENST00000360273 8962 ntTSL 5 BASIC11.41□□□□□ -0.582e-6■■■■□ 25.9
LARP4Q71RC2 PLA2G2A-207ENST00000496748 1306 ntTSL 511.35□□□□□ -0.595e-13■■■■□ 25.9
LARP4Q71RC2 ATP2B2-204ENST00000397077 8964 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.692e-6■■■■□ 25.9
LARP4Q71RC2 ATP2B2-205ENST00000452124 4016 ntTSL 1 (best)10.72□□□□□ -0.692e-6■■■■□ 25.9
LARP4Q71RC2 PLA2G2A-201ENST00000375111 970 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.855e-13■■■■□ 25.9
LARP4Q71RC2 PLA2G2A-205ENST00000482011 735 ntTSL 1 (best)9.74□□□□□ -0.855e-13■■■■□ 25.9
LARP4Q71RC2 ATP2B2-201ENST00000352432 8593 ntTSL 1 (best) BASIC9.45□□□□□ -0.92e-6■■■■□ 25.9
LARP4Q71RC2 ATP2B2-206ENST00000460129 9101 ntTSL 59.39□□□□□ -0.912e-6■■■■□ 25.9
LARP4Q71RC2 ATP2B2-203ENST00000383800 8900 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.912e-6■■■■□ 25.9
LARP4Q71RC2 PLA2G2A-206ENST00000491964 903 ntTSL 38.16□□□□□ -1.15e-13■■■■□ 25.9
LARP4Q71RC2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.81□□□□□ -1.642e-7■■■■□ 25.9
LARP4Q71RC2 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.641e-17■■■■□ 25.9
LARP4Q71RC2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.93■□□□□ 0.622e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.42■□□□□ 0.222e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.74□□□□□ -0.372e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC12.63□□□□□ -0.392e-6■■■■□ 25.9
LARP4Q71RC2 AC019080.1-207ENST00000447413 1182 ntTSL 1 (best)11.44□□□□□ -0.582e-7■■■■□ 25.9
LARP4Q71RC2 HCG18-241ENST00000602290 821 ntTSL 2 BASIC10.37□□□□□ -0.752e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.5□□□□□ -1.052e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC8.06□□□□□ -1.122e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC8.05□□□□□ -1.122e-6■■■■□ 25.9
LARP4Q71RC2 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.26□□□□□ -1.412e-6■■■■□ 25.9
LARP4Q71RC2 AC019080.1-202ENST00000456746 5147 ntTSL 26.12□□□□□ -1.432e-7■■■■□ 25.9
LARP4Q71RC2 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.98□□□□□ -1.452e-7■■■■□ 25.9
LARP4Q71RC2 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.86□□□□□ -1.472e-6■■■■□ 25.9
LARP4Q71RC2 DHRS2-206ENST00000556550 2595 nt14.17□□□□□ -0.142e-24■■■■□ 25.9
LARP4Q71RC2 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.36□□□□□ -1.231e-6■■■■□ 25.9
LARP4Q71RC2 AHNAK-203ENST00000525875 793 ntTSL 39.89□□□□□ -0.832e-16■■■■□ 25.8
LARP4Q71RC2 SERF2-208ENST00000409617 700 ntTSL 213.75□□□□□ -0.214e-20■■■■□ 25.7
LARP4Q71RC2 SERF2-213ENST00000448830 2792 ntTSL 213.38□□□□□ -0.274e-20■■■■□ 25.7
LARP4Q71RC2 RNF44-207ENST00000513029 1647 ntTSL 217.22■□□□□ 0.358e-7■■■■□ 25.7
LARP4Q71RC2 RNF44-204ENST00000506378 848 ntTSL 216.35■□□□□ 0.218e-7■■■■□ 25.7
LARP4Q71RC2 RNF44-205ENST00000508478 662 ntTSL 315.41■□□□□ 0.068e-7■■■■□ 25.7
LARP4Q71RC2 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.158e-7■■■■□ 25.7
LARP4Q71RC2 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC13.14□□□□□ -0.311e-6■■■■□ 25.7
LARP4Q71RC2 SEM1-201ENST00000248566 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.561e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-205ENST00000444799 1590 ntTSL 2 BASIC10.46□□□□□ -0.741e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-204ENST00000417009 350 ntTSL 3 BASIC10.09□□□□□ -0.791e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-206ENST00000449279 699 ntTSL 39.32□□□□□ -0.921e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-210ENST00000488005 775 ntTSL 2 BASIC9.04□□□□□ -0.961e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-223ENST00000623498 582 ntTSL 5 BASIC8.55□□□□□ -1.041e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-203ENST00000413065 661 ntTSL 1 (best) BASIC8.37□□□□□ -1.071e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-224ENST00000623693 729 ntTSL 5 BASIC8.32□□□□□ -1.081e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-214ENST00000613919 610 ntTSL 28.29□□□□□ -1.081e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-207ENST00000466986 507 ntTSL 27.1□□□□□ -1.271e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-217ENST00000617133 591 ntTSL 26.26□□□□□ -1.411e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-220ENST00000619259 462 ntTSL 25.4□□□□□ -1.541e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-219ENST00000618105 544 ntTSL 24.34□□□□□ -1.711e-13■■■■□ 25.6
LARP4Q71RC2 SEM1-209ENST00000482389 2773 ntTSL 22.71□□□□□ -1.981e-13■■■■□ 25.6
LARP4Q71RC2 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.16■□□□□ 0.53e-6■■■■□ 25.6
LARP4Q71RC2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.03□□□□□ -0.483e-6■■■■□ 25.6
LARP4Q71RC2 NFE2L2-211ENST00000464747 2749 ntTSL 2 BASIC10.52□□□□□ -0.734e-19■■■■□ 25.6
LARP4Q71RC2 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.793e-6■■■■□ 25.6
LARP4Q71RC2 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.513e-6■■■■□ 25.6
LARP4Q71RC2 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.39□□□□□ -1.553e-6■■■■□ 25.6
LARP4Q71RC2 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.613e-6■■■■□ 25.6
LARP4Q71RC2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.312e-6■■■■□ 25.6
LARP4Q71RC2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.122e-6■■■■□ 25.6
LARP4Q71RC2 TFF3-202ENST00000398431 452 ntTSL 310.85□□□□□ -0.672e-6■■■■□ 25.6
LARP4Q71RC2 TFF3-203ENST00000489676 419 ntTSL 210.35□□□□□ -0.752e-6■■■■□ 25.6
LARP4Q71RC2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.751e-6■■■■□ 25.6
LARP4Q71RC2 SPR-202ENST00000498749 947 ntTSL 319.39■□□□□ 0.691e-6■■■■□ 25.6
LARP4Q71RC2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.343e-12■■■■□ 25.6
LARP4Q71RC2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.56■□□□□ 0.243e-12■■■■□ 25.6
LARP4Q71RC2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.21□□□□□ -0.33e-12■■■■□ 25.6
LARP4Q71RC2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.485e-9■■■■□ 25.5
LARP4Q71RC2 SIVA1-204ENST00000553810 550 ntTSL 317.3■□□□□ 0.365e-9■■■■□ 25.5
LARP4Q71RC2 SIVA1-206ENST00000554013 461 ntTSL 1 (best)16.82■□□□□ 0.285e-9■■■■□ 25.5
LARP4Q71RC2 SERF2-215ENST00000475927 692 ntTSL 212.06□□□□□ -0.482e-31■■■■□ 25.5
LARP4Q71RC2 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.051e-6■■■■□ 25.5
LARP4Q71RC2 CLPP-205ENST00000596605 646 ntTSL 2 BASIC12.76□□□□□ -0.371e-6■■■■□ 25.5
LARP4Q71RC2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.313e-7■■■■□ 25.5
LARP4Q71RC2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.26■■□□□ 1.313e-7■■■■□ 25.5
LARP4Q71RC2 SURF1-202ENST00000437995 813 ntTSL 517.86■□□□□ 0.453e-7■■■■□ 25.5
LARP4Q71RC2 SURF1-204ENST00000495952 931 ntTSL 29.9□□□□□ -0.823e-7■■■■□ 25.5
LARP4Q71RC2 C8orf59-211ENST00000615071 344 ntTSL 25.8□□□□□ -1.481e-6■■■■□ 25.4
LARP4Q71RC2 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.522e-15■■■■□ 25.4
LARP4Q71RC2 RNF181-205ENST00000456023 559 ntTSL 311.82□□□□□ -0.522e-15■■■■□ 25.4
LARP4Q71RC2 RNF181-201ENST00000306368 569 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.522e-15■■■■□ 25.4
LARP4Q71RC2 RNF181-204ENST00000443647 535 ntTSL 210.59□□□□□ -0.712e-15■■■■□ 25.4
LARP4Q71RC2 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.225e-14■■■■□ 25.4
LARP4Q71RC2 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.235e-14■■■■□ 25.4
LARP4Q71RC2 GJB1-202ENST00000374022 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.465e-14■■■■□ 25.4
LARP4Q71RC2 LINC01029-203ENST00000582805 788 ntTSL 1 (best)13.23□□□□□ -0.294e-6■■■■□ 25.4
LARP4Q71RC2 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.7□□□□□ -0.389e-9■■■■□ 25.4
LARP4Q71RC2 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.016e-11■■■■□ 25.3
LARP4Q71RC2 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC23.32■■□□□ 1.321e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.911e-6■■■■□ 25.3
LARP4Q71RC2 DRAP1-207ENST00000531121 672 ntTSL 320.28■□□□□ 0.841e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.611e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-208ENST00000568494 2046 ntTSL 213.15□□□□□ -0.31e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-207ENST00000568351 964 ntTSL 313.01□□□□□ -0.331e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-210ENST00000568844 5331 nt12.86□□□□□ -0.351e-6■■■■□ 25.3
LARP4Q71RC2 ZNRF1-204ENST00000566244 3980 nt9.89□□□□□ -0.831e-6■■■■□ 25.3
LARP4Q71RC2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.551e-12■■■■□ 25.3
LARP4Q71RC2 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.191e-12■■■■□ 25.3
LARP4Q71RC2 SEC61G-202ENST00000395535 459 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.251e-12■■■■□ 25.3
Retrieved 100 of 15,922 protein–RNA pairs in 561.7 ms