RNA–Protein interactions for RNA: ENST00000506378.1

RNF44-204, Transcript of ring finger protein 44, humanhuman

TSL 2

Gene RNF44, Length 848 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44-204ENST00000506378 NISCHQ9Y2I1 1504 aa41.61■■■■■ 4.25
RNF44-204ENST00000506378 CCDC180Q9P1Z9 1646 aa36.96■■■■□ 3.51
RNF44-204ENST00000506378 ABCC9O60706 1549 aa35.56■■■■□ 3.28
RNF44-204ENST00000506378 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
RNF44-204ENST00000506378 NACADO15069 1562 aa34.62■■■■□ 3.13
RNF44-204ENST00000506378 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
RNF44-204ENST00000506378 DCAF1Q9Y4B6 1507 aa34.57■■■■□ 3.12
RNF44-204ENST00000506378 RB1CC1Q8TDY2 1594 aa34.56■■■■□ 3.12
RNF44-204ENST00000506378 DCAF8L2P0C7V8 631 aa34.43■■■■□ 3.1
RNF44-204ENST00000506378 UNC13AQ9UPW8 1703 aa33.67■■■□□ 2.98
RNF44-204ENST00000506378 SCRIBQ14160 1630 aa33.6■■■□□ 2.97
RNF44-204ENST00000506378 BICRAQ9NZM4 1560 aa33.36■■■□□ 2.93
RNF44-204ENST00000506378 SHROOM4Q9ULL8 1493 aa33.32■■■□□ 2.92
RNF44-204ENST00000506378 PABPN1Q86U42 306 aaKnown RBP eCLIP33.19■■■□□ 2.9
RNF44-204ENST00000506378 EIF4G1Q04637 1599 aaKnown RBP32.52■■■□□ 2.8
RNF44-204ENST00000506378 BAZ1AQ9NRL2 1556 aaPredicted RBP32.31■■■□□ 2.76
RNF44-204ENST00000506378 CC2D2AQ9P2K1 1620 aa32.26■■■□□ 2.75
RNF44-204ENST00000506378 CECR2Q9BXF3 1484 aa32.24■■■□□ 2.75
RNF44-204ENST00000506378 SMARCA4P51532 1647 aa32.23■■■□□ 2.75
RNF44-204ENST00000506378 DNAJC5BQ9UF47 199 aa32.09■■■□□ 2.73
RNF44-204ENST00000506378 SMARCA2P51531 1590 aa32.01■■■□□ 2.71
RNF44-204ENST00000506378 MROH2BQ7Z745 1585 aa32■■■□□ 2.71
RNF44-204ENST00000506378 PEG3Q9GZU2 1588 aa31.97■■■□□ 2.71
RNF44-204ENST00000506378 ATAD2BQ9ULI0 1458 aa31.91■■■□□ 2.7
RNF44-204ENST00000506378 NCAPD3P42695 1498 aa31.88■■■□□ 2.69
RNF44-204ENST00000506378 HMGXB3Q12766 1538 aa31.84■■■□□ 2.69
RNF44-204ENST00000506378 RSF1Q96T23 1441 aaPredicted RBP31.8■■■□□ 2.68
RNF44-204ENST00000506378 BAZ1BQ9UIG0 1483 aaKnown RBP31.72■■■□□ 2.67
RNF44-204ENST00000506378 WIZO95785 1651 aa31.69■■■□□ 2.66
RNF44-204ENST00000506378 TOP2AP11388 1531 aaKnown RBP31.49■■■□□ 2.63
RNF44-204ENST00000506378 SUPT5HO00267 1087 aaKnown RBP31.17■■■□□ 2.58
RNF44-204ENST00000506378 LAMC3Q9Y6N6 1575 aa31.05■■■□□ 2.56
RNF44-204ENST00000506378 CCDC88BA6NC98 1476 aa31.01■■■□□ 2.55
RNF44-204ENST00000506378 CADPSQ9ULU8 1353 aa30.94■■■□□ 2.54
RNF44-204ENST00000506378 CFTRP13569 1480 aa30.87■■■□□ 2.53
RNF44-204ENST00000506378 NESP48681 1621 aa30.84■■■□□ 2.53
RNF44-204ENST00000506378 PDS5BQ9NTI5 1447 aa30.8■■■□□ 2.52
RNF44-204ENST00000506378 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
RNF44-204ENST00000506378 ERCC6Q03468 1493 aa30.73■■■□□ 2.51
RNF44-204ENST00000506378 KIF21AQ7Z4S6 1674 aa30.59■■■□□ 2.49
RNF44-204ENST00000506378 FANCD2Q9BXW9 1451 aa30.59■■■□□ 2.49
RNF44-204ENST00000506378 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
RNF44-204ENST00000506378 THOC2Q8NI27 1593 aaKnown RBP30.44■■■□□ 2.46
RNF44-204ENST00000506378 MRC2Q9UBG0 1479 aa30.44■■■□□ 2.46
RNF44-204ENST00000506378 WDR62O43379 1518 aa30.33■■■□□ 2.45
RNF44-204ENST00000506378 CUX2O14529 1486 aa30.32■■■□□ 2.44
RNF44-204ENST00000506378 ABCC8Q09428 1581 aa30.3■■■□□ 2.44
RNF44-204ENST00000506378 URB2Q14146 1524 aaKnown RBP30.21■■■□□ 2.43
RNF44-204ENST00000506378 DNMBPQ6XZF7 1577 aa30.2■■■□□ 2.43
RNF44-204ENST00000506378 TOPBP1Q92547 1522 aa30.14■■■□□ 2.42
RNF44-204ENST00000506378 WRNQ14191 1432 aaPredicted RBP eCLIP30.04■■■□□ 2.4
RNF44-204ENST00000506378 CUX1P39880 1505 aa30.02■■■□□ 2.4
RNF44-204ENST00000506378 BIVM-ERCC5R4GMW8 1640 aa29.96■■■□□ 2.39
RNF44-204ENST00000506378 TOP2BQ02880 1626 aa29.96■■■□□ 2.39
RNF44-204ENST00000506378 IFT140Q96RY7 1462 aa29.92■■■□□ 2.38
RNF44-204ENST00000506378 POLA1P09884 1462 aaPredicted RBP29.91■■■□□ 2.38
RNF44-204ENST00000506378 FGD5Q6ZNL6 1462 aa29.89■■■□□ 2.38
RNF44-204ENST00000506378 SYNJ1O43426 1573 aa29.89■■■□□ 2.38
RNF44-204ENST00000506378 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
RNF44-204ENST00000506378 SOGA1O94964 1423 aa29.78■■■□□ 2.36
RNF44-204ENST00000506378 WDR97A6NE52 1622 aa29.77■■■□□ 2.36
RNF44-204ENST00000506378 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
RNF44-204ENST00000506378 ABCA10Q8WWZ4 1543 aa29.67■■■□□ 2.34
RNF44-204ENST00000506378 EIF4G3O43432 1585 aaKnown RBP29.62■■■□□ 2.33
RNF44-204ENST00000506378 ZNF608Q9ULD9 1512 aaPredicted RBP29.6■■■□□ 2.33
RNF44-204ENST00000506378 TRIM41Q8WV44 630 aa29.53■■■□□ 2.32
RNF44-204ENST00000506378 ABCA5Q8WWZ7 1642 aa29.53■■■□□ 2.32
RNF44-204ENST00000506378 TDRD9Q8NDG6 1382 aaKnown RBP29.49■■■□□ 2.31
RNF44-204ENST00000506378 AQRO60306 1485 aaKnown RBP eCLIP29.48■■■□□ 2.313e-7■■■□□ 16
RNF44-204ENST00000506378 GAPVD1Q14C86 1478 aa29.48■■■□□ 2.31
RNF44-204ENST00000506378 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
RNF44-204ENST00000506378 PBRM1Q86U86 1689 aa29.43■■■□□ 2.3
RNF44-204ENST00000506378 KIF27Q86VH2 1401 aa29.41■■■□□ 2.3
RNF44-204ENST00000506378 MAGI1Q96QZ7 1491 aaPredicted RBP29.37■■■□□ 2.29
RNF44-204ENST00000506378 ERICH3Q5RHP9 1530 aa29.36■■■□□ 2.29
RNF44-204ENST00000506378 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
RNF44-204ENST00000506378 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
RNF44-204ENST00000506378 SYNJ2O15056 1496 aa29.22■■■□□ 2.27
RNF44-204ENST00000506378 ADAMTS12P58397 1594 aa29.22■■■□□ 2.27
RNF44-204ENST00000506378 CUL7Q14999 1698 aa29.21■■■□□ 2.27
RNF44-204ENST00000506378 EEA1Q15075 1411 aa29.2■■■□□ 2.26
RNF44-204ENST00000506378 FHAD1B1AJZ9 1412 aa29.18■■■□□ 2.26
RNF44-204ENST00000506378 CHD1O14646 1710 aa29.14■■■□□ 2.26
RNF44-204ENST00000506378 IGF1RP08069 1367 aa29.13■■■□□ 2.25
RNF44-204ENST00000506378 CHMP7Q8WUX9 453 aaPredicted RBP29.1■■■□□ 2.25
RNF44-204ENST00000506378 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
RNF44-204ENST00000506378 GRIN2AQ12879 1464 aa29.05■■■□□ 2.24
RNF44-204ENST00000506378 FBLN2P98095 1184 aa29.04■■■□□ 2.24
RNF44-204ENST00000506378 OSCARQ8IYS5 282 aa29.03■■■□□ 2.24
RNF44-204ENST00000506378 CARMIL1Q5VZK9 1371 aa29.01■■■□□ 2.23
RNF44-204ENST00000506378 RAPGEF2Q9Y4G8 1499 aa28.93■■■□□ 2.22
RNF44-204ENST00000506378 CSRNP3Q8WYN3 585 aa28.92■■■□□ 2.22
RNF44-204ENST00000506378 NUP160Q12769 1436 aa28.91■■■□□ 2.22
RNF44-204ENST00000506378 PRXQ9BXM0 1461 aa28.9■■■□□ 2.22
RNF44-204ENST00000506378 CLASP1Q7Z460 1538 aa28.86■■■□□ 2.21
RNF44-204ENST00000506378 CEP170Q5SW79 1584 aa28.85■■■□□ 2.21
RNF44-204ENST00000506378 KIF21BO75037 1637 aa28.8■■■□□ 2.2
RNF44-204ENST00000506378 FAM9AQ8IZU1 332 aaPredicted RBP28.76■■■□□ 2.19
RNF44-204ENST00000506378 DNAJC5Q9H3Z4 198 aa28.76■■■□□ 2.19
RNF44-204ENST00000506378 KIAA0586Q9BVV6 1533 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms