RNA–Protein interactions for RNA: ENST00000495952.5

SURF1-204, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 2

Gene SURF1, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-204ENST00000495952 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
SURF1-204ENST00000495952 CCDC180Q9P1Z9 1646 aa17.95■□□□□ 0.46
SURF1-204ENST00000495952 ZCCHC6Q5VYS8 1495 aaKnown RBP17.6■□□□□ 0.41
SURF1-204ENST00000495952 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
SURF1-204ENST00000495952 SHROOM4Q9ULL8 1493 aa17.12■□□□□ 0.33
SURF1-204ENST00000495952 MYO15BQ96JP2 1530 aa16.8■□□□□ 0.28
SURF1-204ENST00000495952 SUPT5HO00267 1087 aaKnown RBP16.77■□□□□ 0.28
SURF1-204ENST00000495952 ABCC9O60706 1549 aa16.69■□□□□ 0.26
SURF1-204ENST00000495952 CHIC1Q5VXU3 224 aa16.54■□□□□ 0.24
SURF1-204ENST00000495952 DCAF8L2P0C7V8 631 aa16.45■□□□□ 0.22
SURF1-204ENST00000495952 NACADO15069 1562 aa16.42■□□□□ 0.22
SURF1-204ENST00000495952 SCRIBQ14160 1630 aa16.39■□□□□ 0.21
SURF1-204ENST00000495952 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
SURF1-204ENST00000495952 RSF1Q96T23 1441 aaPredicted RBP16.26■□□□□ 0.19
SURF1-204ENST00000495952 HRCP23327 699 aa16.15■□□□□ 0.18
SURF1-204ENST00000495952 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
SURF1-204ENST00000495952 EIF4G1Q04637 1599 aaKnown RBP15.98■□□□□ 0.15
SURF1-204ENST00000495952 MROH2BQ7Z745 1585 aa15.98■□□□□ 0.15
SURF1-204ENST00000495952 WIZO95785 1651 aa15.95■□□□□ 0.14
SURF1-204ENST00000495952 UNC13AQ9UPW8 1703 aa15.93■□□□□ 0.14
SURF1-204ENST00000495952 CECR2Q9BXF3 1484 aa15.91■□□□□ 0.14
SURF1-204ENST00000495952 PCGF6Q9BYE7 350 aa15.88■□□□□ 0.13
SURF1-204ENST00000495952 TOP2AP11388 1531 aaKnown RBP15.85■□□□□ 0.13
SURF1-204ENST00000495952 SMARCA4P51532 1647 aa15.84■□□□□ 0.13
SURF1-204ENST00000495952 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
SURF1-204ENST00000495952 LOC105371045A0A1W2PR82 267 aa15.8■□□□□ 0.12
SURF1-204ENST00000495952 TRIM41Q8WV44 630 aa15.79■□□□□ 0.12
SURF1-204ENST00000495952 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
SURF1-204ENST00000495952 PEG3Q9GZU2 1588 aa15.67■□□□□ 0.1
SURF1-204ENST00000495952 ZEB1P37275 1124 aaPredicted RBP15.67■□□□□ 0.1
SURF1-204ENST00000495952 EEA1Q15075 1411 aa15.58■□□□□ 0.08
SURF1-204ENST00000495952 BICRAQ9NZM4 1560 aa15.57■□□□□ 0.08
SURF1-204ENST00000495952 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
SURF1-204ENST00000495952 WRNQ14191 1432 aaPredicted RBP eCLIP15.51■□□□□ 0.07
SURF1-204ENST00000495952 ABCC8Q09428 1581 aa15.49■□□□□ 0.07
SURF1-204ENST00000495952 PPARGC1BQ86YN6 1023 aaKnown RBP15.47■□□□□ 0.07
SURF1-204ENST00000495952 FAM9AQ8IZU1 332 aaPredicted RBP15.41■□□□□ 0.06
SURF1-204ENST00000495952 KIF21BO75037 1637 aa15.4■□□□□ 0.06
SURF1-204ENST00000495952 TNIKQ9UKE5 1360 aa15.37■□□□□ 0.05
SURF1-204ENST00000495952 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
SURF1-204ENST00000495952 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
SURF1-204ENST00000495952 SYNJ1O43426 1573 aa15.28■□□□□ 0.04
SURF1-204ENST00000495952 ATAD2BQ9ULI0 1458 aa15.28■□□□□ 0.04
SURF1-204ENST00000495952 BIVM-ERCC5R4GMW8 1640 aa15.27■□□□□ 0.03
SURF1-204ENST00000495952 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
SURF1-204ENST00000495952 CEP164Q9UPV0 1460 aa15.27■□□□□ 0.03
SURF1-204ENST00000495952 SOGA1O94964 1423 aa15.26■□□□□ 0.03
SURF1-204ENST00000495952 TOP2BQ02880 1626 aa15.22■□□□□ 0.03
SURF1-204ENST00000495952 HMGXB3Q12766 1538 aa15.22■□□□□ 0.03
SURF1-204ENST00000495952 PRDM2Q13029 1718 aa15.21■□□□□ 0.03
SURF1-204ENST00000495952 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
SURF1-204ENST00000495952 RUSC2Q8N2Y8 1516 aa15.16■□□□□ 0.02
SURF1-204ENST00000495952 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
SURF1-204ENST00000495952 EHMT2Q96KQ7 1210 aa15.07■□□□□ 0
SURF1-204ENST00000495952 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
SURF1-204ENST00000495952 NCAPD3P42695 1498 aa15.05■□□□□ -0
SURF1-204ENST00000495952 CLIP1P30622 1438 aa15.03■□□□□ -0
SURF1-204ENST00000495952 PABPN1Q86U42 306 aaKnown RBP eCLIP15.03■□□□□ -0
SURF1-204ENST00000495952 CCER1Q8TC90 406 aaPredicted RBP15.01□□□□□ -0.01
SURF1-204ENST00000495952 UBTFP17480 764 aaKnown RBP14.98□□□□□ -0.01
SURF1-204ENST00000495952 PRXQ9BXM0 1461 aa14.97□□□□□ -0.01
SURF1-204ENST00000495952 RAPGEF2Q9Y4G8 1499 aa14.96□□□□□ -0.01
SURF1-204ENST00000495952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.94□□□□□ -0.02
SURF1-204ENST00000495952 CUX1P39880 1505 aa14.92□□□□□ -0.02
SURF1-204ENST00000495952 CFTRP13569 1480 aa14.91□□□□□ -0.02
SURF1-204ENST00000495952 PELP1Q8IZL8 1130 aaKnown RBP14.88□□□□□ -0.03
SURF1-204ENST00000495952 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
SURF1-204ENST00000495952 KIF27Q86VH2 1401 aa14.85□□□□□ -0.03
SURF1-204ENST00000495952 CLSPNQ9HAW4 1339 aa14.81□□□□□ -0.04
SURF1-204ENST00000495952 MAP3K1Q13233 1512 aa14.8□□□□□ -0.04
SURF1-204ENST00000495952 CUX2O14529 1486 aa14.78□□□□□ -0.04
SURF1-204ENST00000495952 APLP2Q06481 763 aa14.77□□□□□ -0.05
SURF1-204ENST00000495952 DIEXFQ68CQ4 756 aaKnown RBP14.77□□□□□ -0.05
SURF1-204ENST00000495952 SCAF1Q9H7N4 1312 aaKnown RBP14.76□□□□□ -0.05
SURF1-204ENST00000495952 RRBP1Q9P2E9 1410 aaKnown RBP14.75□□□□□ -0.05
SURF1-204ENST00000495952 ZNF316A6NFI3 1004 aaPredicted RBP14.74□□□□□ -0.05
SURF1-204ENST00000495952 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
SURF1-204ENST00000495952 CFAP43Q8NDM7 1665 aa14.74□□□□□ -0.05
SURF1-204ENST00000495952 ACIN1Q9UKV3 1341 aaKnown RBP14.73□□□□□ -0.05
SURF1-204ENST00000495952 ARHGAP35Q9NRY4 1499 aa14.7□□□□□ -0.06
SURF1-204ENST00000495952 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
SURF1-204ENST00000495952 TIAM1Q13009 1591 aa14.68□□□□□ -0.06
SURF1-204ENST00000495952 CUL7Q14999 1698 aa14.68□□□□□ -0.06
SURF1-204ENST00000495952 TTBK1Q5TCY1 1321 aaPredicted RBP14.66□□□□□ -0.06
SURF1-204ENST00000495952 CTTNBP2Q8WZ74 1663 aa14.66□□□□□ -0.06
SURF1-204ENST00000495952 DNMBPQ6XZF7 1577 aa14.65□□□□□ -0.06
SURF1-204ENST00000495952 CADPSQ9ULU8 1353 aa14.64□□□□□ -0.07
SURF1-204ENST00000495952 EFCAB5A4FU69 1503 aa14.63□□□□□ -0.07
SURF1-204ENST00000495952 FGD5Q6ZNL6 1462 aa14.63□□□□□ -0.07
SURF1-204ENST00000495952 WDR97A6NE52 1622 aa14.63□□□□□ -0.07
SURF1-204ENST00000495952 DHX57Q6P158 1386 aaKnown RBP14.61□□□□□ -0.07
SURF1-204ENST00000495952 HNRNPUL2Q1KMD3 747 aaKnown RBP14.59□□□□□ -0.07
SURF1-204ENST00000495952 NEUROD1Q13562 356 aa14.58□□□□□ -0.08
SURF1-204ENST00000495952 KIF21AQ7Z4S6 1674 aa14.58□□□□□ -0.08
SURF1-204ENST00000495952 FHAD1B1AJZ9 1412 aa14.58□□□□□ -0.08
SURF1-204ENST00000495952 CCNB3Q8WWL7 1395 aa14.57□□□□□ -0.08
SURF1-204ENST00000495952 ABCA10Q8WWZ4 1543 aa14.56□□□□□ -0.08
SURF1-204ENST00000495952 IGF1RP08069 1367 aa14.56□□□□□ -0.08
SURF1-204ENST00000495952 AQRO60306 1485 aaKnown RBP eCLIP14.56□□□□□ -0.08
SURF1-204ENST00000495952 PCF11O94913 1555 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 240.9 ms