Protein–RNA interactions for Protein: P32842

VMA11, V-type proton ATPase subunit c', yeast

Predictions only

Length 164 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA11	P32842	TRM44	YPL030W	1704 nt		3.92	□□□□□ -1.78
VMA11	P32842	EMP46	YLR080W	1335 nt		3.92	□□□□□ -1.78
VMA11	P32842	TFC7	YOR110W	1308 nt		3.92	□□□□□ -1.78
VMA11	P32842	PCL8	YPL219W	1479 nt		3.92	□□□□□ -1.78
VMA11	P32842	GCR2	YNL199C	1605 nt		3.92	□□□□□ -1.78
VMA11	P32842	CCS1	YMR038C	750 nt		3.91	□□□□□ -1.78
VMA11	P32842	ADD37	YMR184W	597 nt		3.91	□□□□□ -1.78
VMA11	P32842	YNL228W	YNL228W	777 nt		3.91	□□□□□ -1.78
VMA11	P32842	MRP21	YBL090W	534 nt		3.91	□□□□□ -1.78
VMA11	P32842	MDR1	YGR100W	2853 nt		3.91	□□□□□ -1.78
VMA11	P32842	HRK1	YOR267C	2280 nt		3.91	□□□□□ -1.78
VMA11	P32842	BRE2	YLR015W	1518 nt		3.9	□□□□□ -1.78
VMA11	P32842	MCM4	YPR019W	2802 nt		3.9	□□□□□ -1.78
VMA11	P32842	SAF1	YBR280C	1914 nt		3.9	□□□□□ -1.78
VMA11	P32842	PUT1	YLR142W	1431 nt		3.9	□□□□□ -1.78
VMA11	P32842	GTO1	YGR154C	1071 nt		3.9	□□□□□ -1.79
VMA11	P32842	YHR140W	YHR140W	720 nt		3.9	□□□□□ -1.79
VMA11	P32842	YHR193C-A	YHR193C-A	375 nt		3.9	□□□□□ -1.79
VMA11	P32842	SMA1	YPL027W	738 nt		3.9	□□□□□ -1.79
VMA11	P32842	CTT1	YGR088W	1689 nt		3.9	□□□□□ -1.79
VMA11	P32842	SAC1	YKL212W	1872 nt		3.9	□□□□□ -1.79
VMA11	P32842	STE7	YDL159W	1548 nt		3.9	□□□□□ -1.79
VMA11	P32842	PRT1	YOR361C	2292 nt		3.9	□□□□□ -1.79
VMA11	P32842	YMR111C	YMR111C	1389 nt		3.89	□□□□□ -1.79
VMA11	P32842	MPH2	YDL247W	1830 nt		3.89	□□□□□ -1.79
VMA11	P32842	PTR2	YKR093W	1806 nt		3.89	□□□□□ -1.79
VMA11	P32842	CDC10	YCR002C	969 nt		3.89	□□□□□ -1.79
VMA11	P32842	YGR122W	YGR122W	1209 nt		3.89	□□□□□ -1.79
VMA11	P32842	ECM1	YAL059W	639 nt		3.89	□□□□□ -1.79
VMA11	P32842	APS1	YLR170C	471 nt		3.89	□□□□□ -1.79
VMA11	P32842	YML057C-A	YML057C-A	390 nt		3.89	□□□□□ -1.79
VMA11	P32842	YNL194C	YNL194C	906 nt		3.89	□□□□□ -1.79
VMA11	P32842	ZPS1	YOL154W	750 nt		3.89	□□□□□ -1.79
VMA11	P32842	MED4	YOR174W	855 nt		3.89	□□□□□ -1.79
VMA11	P32842	ELC1	YPL046C	300 nt		3.89	□□□□□ -1.79
VMA11	P32842	YPL113C	YPL113C	1191 nt		3.89	□□□□□ -1.79
VMA11	P32842	YCL021W-A	YCL021W-A	378 nt		3.89	□□□□□ -1.79
VMA11	P32842	SIS2	YKR072C	1689 nt		3.89	□□□□□ -1.79
VMA11	P32842	ASA1	YPR085C	1332 nt		3.89	□□□□□ -1.79
VMA11	P32842	BUD7	YOR299W	2241 nt		3.89	□□□□□ -1.79
VMA11	P32842	SWI3	YJL176C	2478 nt		3.88	□□□□□ -1.79
VMA11	P32842	GDE1	YPL110C	3672 nt		3.88	□□□□□ -1.79
VMA11	P32842	HMLALPHA1	YCL066W	528 nt		3.88	□□□□□ -1.79
VMA11	P32842	MATALPHA1	YCR040W	528 nt		3.88	□□□□□ -1.79
VMA11	P32842	UPS3	YDR185C	540 nt		3.88	□□□□□ -1.79
VMA11	P32842	TRS23	YDR246W	660 nt		3.88	□□□□□ -1.79
VMA11	P32842	GLE2	YER107C	1098 nt		3.88	□□□□□ -1.79
VMA11	P32842	AIF1	YNR074C	1137 nt		3.88	□□□□□ -1.79
VMA11	P32842	YMR102C	YMR102C	2505 nt		3.88	□□□□□ -1.79
VMA11	P32842	PEX29	YDR479C	1665 nt		3.87	□□□□□ -1.79
VMA11	P32842	KRS1	YDR037W	1776 nt		3.87	□□□□□ -1.79
VMA11	P32842	PRP28	YDR243C	1767 nt		3.87	□□□□□ -1.79
VMA11	P32842	PRP40	YKL012W	1752 nt		3.87	□□□□□ -1.79
VMA11	P32842	TEF4	YKL081W	1239 nt		3.87	□□□□□ -1.79
VMA11	P32842	MET31	YPL038W	534 nt		3.87	□□□□□ -1.79
VMA11	P32842	TSL1	YML100W	3297 nt		3.87	□□□□□ -1.79
VMA11	P32842	LPL1	YOR059C	1353 nt		3.87	□□□□□ -1.79
VMA11	P32842	AIR2	YDL175C	1035 nt		3.86	□□□□□ -1.79
VMA11	P32842	YAR019W-A	YAR019W-A	333 nt		3.86	□□□□□ -1.79
VMA11	P32842	CTR3	YLR411W	726 nt		3.86	□□□□□ -1.79
VMA11	P32842	MTF1	YMR228W	1026 nt		3.86	□□□□□ -1.79
VMA11	P32842	YMR245W	YMR245W	621 nt		3.86	□□□□□ -1.79
VMA11	P32842	snR10	snR10	245 nt		3.86	□□□□□ -1.79
VMA11	P32842	SED4	YCR067C	3198 nt		3.86	□□□□□ -1.79
VMA11	P32842	PRO2	YOR323C	1371 nt		3.86	□□□□□ -1.79
VMA11	P32842	RTT103	YDR289C	1230 nt		3.85	□□□□□ -1.79
VMA11	P32842	TRX2	YGR209C	315 nt		3.85	□□□□□ -1.79
VMA11	P32842	COS6	YGR295C	1146 nt		3.85	□□□□□ -1.79
VMA11	P32842	BSC5	YNR069C	1470 nt		3.85	□□□□□ -1.79
VMA11	P32842	RIM21	YNL294C	1602 nt		3.84	□□□□□ -1.79
VMA11	P32842	HXT14	YNL318C	1623 nt		3.84	□□□□□ -1.79
VMA11	P32842	YPL260W	YPL260W	1656 nt		3.84	□□□□□ -1.79
VMA11	P32842	FAP1	YNL023C	2898 nt		3.84	□□□□□ -1.79
VMA11	P32842	HST4	YDR191W	1113 nt		3.84	□□□□□ -1.79
VMA11	P32842	YNL134C	YNL134C	1131 nt		3.84	□□□□□ -1.79
VMA11	P32842	MAP2	YBL091C	1266 nt		3.84	□□□□□ -1.79
VMA11	P32842	TLG2	YOL018C	1194 nt		3.84	□□□□□ -1.79
VMA11	P32842	CDS1	YBR029C	1374 nt		3.84	□□□□□ -1.79
VMA11	P32842	YMR196W	YMR196W	3267 nt		3.84	□□□□□ -1.79
VMA11	P32842	RRP3	YHR065C	1506 nt		3.84	□□□□□ -1.8
VMA11	P32842	YEH2	YLR020C	1617 nt		3.84	□□□□□ -1.8
VMA11	P32842	TIF4632	YGL049C	2745 nt		3.84	□□□□□ -1.8
VMA11	P32842	SAP155	YFR040W	3009 nt		3.84	□□□□□ -1.8
VMA11	P32842	SLC1	YDL052C	912 nt		3.83	□□□□□ -1.8
VMA11	P32842	AAD4	YDL243C	990 nt		3.83	□□□□□ -1.8
VMA11	P32842	AI5_BETA	Q0075	1065 nt		3.83	□□□□□ -1.8
VMA11	P32842	HEM15	YOR176W	1182 nt		3.83	□□□□□ -1.8
VMA11	P32842	GMC1	YDR506C	1827 nt		3.83	□□□□□ -1.8
VMA11	P32842	ROT2	YBR229C	2865 nt		3.82	□□□□□ -1.8
VMA11	P32842	CLA4	YNL298W	2529 nt		3.82	□□□□□ -1.8
VMA11	P32842	STE12	YHR084W	2067 nt		3.82	□□□□□ -1.8
VMA11	P32842	LCB2	YDR062W	1686 nt		3.82	□□□□□ -1.8
VMA11	P32842	BUD22	YMR014W	1560 nt		3.82	□□□□□ -1.8
VMA11	P32842	YDL124W	YDL124W	939 nt		3.82	□□□□□ -1.8
VMA11	P32842	EAF5	YEL018W	840 nt		3.82	□□□□□ -1.8
VMA11	P32842	SPR6	YER115C	576 nt		3.82	□□□□□ -1.8
VMA11	P32842	NMA1	YLR328W	1206 nt		3.82	□□□□□ -1.8
VMA11	P32842	MVD1	YNR043W	1191 nt		3.82	□□□□□ -1.8
VMA11	P32842	PEP4	YPL154C	1218 nt		3.82	□□□□□ -1.8
VMA11	P32842	ATG14	YBR128C	1035 nt		3.82	□□□□□ -1.8

Retrieved 100 of 7,029 protein–RNA pairs in 14.3 ms