RNA–Protein interactions for RNA: YNL228W

YNL228W, Transcript of Dubious open reading frame, yeastyeast

Gene YNL228W, Length 777 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL228WYNL228W MTC1P47018 478 aaKnown RBP17.89■□□□□ 0.45
YNL228WYNL228W DRS1P32892 752 aaKnown RBP17.13■□□□□ 0.33
YNL228WYNL228W FAP1P53971 965 aa15.65■□□□□ 0.1
YNL228WYNL228W PRI1P10363 409 aa14.86□□□□□ -0.03
YNL228WYNL228W DIP2Q12220 943 aaPredicted RBP14.86□□□□□ -0.03
YNL228WYNL228W PRY3P47033 881 aa14.71□□□□□ -0.05
YNL228WYNL228W AAD16Q02895 342 aa14.69□□□□□ -0.06
YNL228WYNL228W ISW2Q08773 1120 aa14.66□□□□□ -0.06
YNL228WYNL228W RPG1P38249 964 aaKnown RBP14.6□□□□□ -0.07
YNL228WYNL228W AVT3P36062 692 aa14.45□□□□□ -0.1
YNL228WYNL228W BFR2Q06631 534 aaKnown RBP14.41□□□□□ -0.1
YNL228WYNL228W RSE1Q04693 1361 aaKnown RBP14.22□□□□□ -0.13
YNL228WYNL228W TSR3Q12094 313 aaKnown RBP14.12□□□□□ -0.15
YNL228WYNL228W YCK3P39962 524 aa14.04□□□□□ -0.16
YNL228WYNL228W RPL17AP05740 184 aaKnown RBP13.8□□□□□ -0.2
YNL228WYNL228W RPL17BP46990 184 aaKnown RBP13.8□□□□□ -0.2
YNL228WYNL228W HAA1Q12753 694 aaKnown RBP13.72□□□□□ -0.21
YNL228WYNL228W REB1P21538 810 aa13.63□□□□□ -0.23
YNL228WYNL228W MRPL32P25348 183 aa13.46□□□□□ -0.25
YNL228WYNL228W SPT21P35209 758 aa13.25□□□□□ -0.29
YNL228WYNL228W YKR023WP36119 530 aaKnown RBP13.03□□□□□ -0.32
YNL228WYNL228W CDC27P38042 758 aa12.99□□□□□ -0.33
YNL228WYNL228W TFA1P36100 482 aa12.95□□□□□ -0.34
YNL228WYNL228W RIM101P33400 625 aa12.84□□□□□ -0.35
YNL228WYNL228W HOP09932 586 aa12.79□□□□□ -0.36
YNL228WYNL228W DCD1P06773 312 aa12.77□□□□□ -0.37
YNL228WYNL228W YGL015CP33199 130 aa12.75□□□□□ -0.37
YNL228WYNL228W TFC8Q12308 588 aa12.73□□□□□ -0.37
YNL228WYNL228W MAP2P38174 421 aaKnown RBP12.51□□□□□ -0.41
YNL228WYNL228W OXP1P28273 1286 aa12.49□□□□□ -0.41
YNL228WYNL228W UBP10P53874 792 aaPredicted RBP12.4□□□□□ -0.42
YNL228WYNL228W BCH2P36122 765 aa12.35□□□□□ -0.43
YNL228WYNL228W SCY1P53009 804 aa12.31□□□□□ -0.44
YNL228WYNL228W PTP3P40048 928 aa12.2□□□□□ -0.46
YNL228WYNL228W YIL055CP40523 627 aaKnown RBP12.18□□□□□ -0.46
YNL228WYNL228W YAH1Q12184 172 aaKnown RBP12.17□□□□□ -0.46
YNL228WYNL228W SLX5P32828 619 aaKnown RBP12.06□□□□□ -0.48
YNL228WYNL228W EPS1P40557 701 aa12.06□□□□□ -0.48
YNL228WYNL228W RSM7P47150 247 aa12.04□□□□□ -0.48
YNL228WYNL228W BDF1P35817 686 aa11.99□□□□□ -0.49
YNL228WYNL228W YLR271WQ06152 274 aa11.97□□□□□ -0.49
YNL228WYNL228W AI2P03876 854 aa11.91□□□□□ -0.5
YNL228WYNL228W SSP1P38871 571 aa11.86□□□□□ -0.51
YNL228WYNL228W TIF4632P39936 914 aaKnown RBP11.86□□□□□ -0.51
YNL228WYNL228W TGL3P40308 642 aa11.83□□□□□ -0.52
YNL228WYNL228W BBC1P47068 1157 aa11.81□□□□□ -0.52
YNL228WYNL228W RQC2Q12532 1038 aaKnown RBP11.78□□□□□ -0.52
YNL228WYNL228W PSD2P53037 1138 aaKnown RBP11.72□□□□□ -0.53
YNL228WYNL228W ARP8Q12386 881 aaKnown RBP RIP-Chip data11.67□□□□□ -0.54not detected
YNL228WYNL228W CST9Q06032 482 aa11.61□□□□□ -0.55
YNL228WYNL228W BUD31P25337 157 aaPredicted RBP11.55□□□□□ -0.56
YNL228WYNL228W MRM1P25270 412 aa11.53□□□□□ -0.56
YNL228WYNL228W MGA2P40578 1113 aa11.51□□□□□ -0.57
YNL228WYNL228W MST1P07236 462 aa11.41□□□□□ -0.58
YNL228WYNL228W NSR1P27476 414 aaKnown RBP RIP-Chip data11.41□□□□□ -0.58not detected
YNL228WYNL228W YOR238WQ08634 303 aa11.39□□□□□ -0.59
YNL228WYNL228W YAP5P40574 245 aa11.37□□□□□ -0.59
YNL228WYNL228W RCR1P38212 213 aa11.32□□□□□ -0.6
YNL228WYNL228W PIB1Q06651 286 aa11.31□□□□□ -0.6
YNL228WYNL228W UBP9P39967 754 aa11.29□□□□□ -0.6
YNL228WYNL228W VPS29P38759 282 aa11.27□□□□□ -0.61
YNL228WYNL228W RTG3P38165 486 aa11.24□□□□□ -0.61
YNL228WYNL228W YBL029C-AQ3E756 94 aa11.23□□□□□ -0.61
YNL228WYNL228W YFR006WP43590 535 aa11.18□□□□□ -0.62
YNL228WYNL228W STS1P38637 319 aa11.16□□□□□ -0.62
YNL228WYNL228W DBP1P24784 617 aaKnown RBP11.15□□□□□ -0.62
YNL228WYNL228W YMR1P47147 688 aaKnown RBP RIP-Chip data11.15□□□□□ -0.62not detected
YNL228WYNL228W WSC3Q12215 556 aa11.14□□□□□ -0.63
YNL228WYNL228W VNX1P42839 908 aa11.1□□□□□ -0.63
YNL228WYNL228W GTT3P39996 337 aa11.08□□□□□ -0.64
YNL228WYNL228W SIS1P25294 352 aaKnown RBP11.03□□□□□ -0.64
YNL228WYNL228W RAM2P29703 316 aa11.03□□□□□ -0.64
YNL228WYNL228W VMA1P17255 1071 aaKnown RBP10.97□□□□□ -0.65
YNL228WYNL228W SPP1Q03012 353 aa10.97□□□□□ -0.65
YNL228WYNL228W TIF11P38912 153 aaKnown RBP10.9□□□□□ -0.66
YNL228WYNL228W SET4P42948 560 aa10.9□□□□□ -0.66
YNL228WYNL228W YOL036WQ08206 761 aa10.9□□□□□ -0.66
YNL228WYNL228W DMA1P38823 416 aa10.89□□□□□ -0.67
YNL228WYNL228W MAK11P20484 414 aaKnown RBP10.86□□□□□ -0.67
YNL228WYNL228W SAM3Q08986 587 aa10.86□□□□□ -0.67
YNL228WYNL228W ULI1P43604 169 aa10.83□□□□□ -0.68
YNL228WYNL228W EDS1P38073 919 aa10.81□□□□□ -0.68
YNL228WYNL228W IOC2Q12072 812 aa10.81□□□□□ -0.68
YNL228WYNL228W MSB4Q12317 492 aa10.8□□□□□ -0.68
YNL228WYNL228W MIF2P35201 549 aa10.79□□□□□ -0.68
YNL228WYNL228W LDB19Q12502 818 aa10.76□□□□□ -0.69
YNL228WYNL228W TRP5P00931 707 aaKnown RBP10.75□□□□□ -0.69
YNL228WYNL228W COQ8P27697 501 aa10.74□□□□□ -0.69
YNL228WYNL228W GYP5Q12344 894 aa10.73□□□□□ -0.69
YNL228WYNL228W EAP1P36041 632 aaKnown RBP10.7□□□□□ -0.7
YNL228WYNL228W FKH1P40466 484 aa10.7□□□□□ -0.7
YNL228WYNL228W PTC3P34221 468 aaKnown RBP10.69□□□□□ -0.7
YNL228WYNL228W DCW1P36091 449 aa10.69□□□□□ -0.7
YNL228WYNL228W AIR2Q12476 344 aaKnown RBP10.69□□□□□ -0.7
YNL228WYNL228W TAF7Q05021 590 aa10.68□□□□□ -0.7
YNL228WYNL228W GRE2Q12068 342 aaKnown RBP10.63□□□□□ -0.71
YNL228WYNL228W RTG1P32607 177 aa10.61□□□□□ -0.71
YNL228WYNL228W HTA1P04911 132 aaKnown RBP10.59□□□□□ -0.71
YNL228WYNL228W HTA2P04912 132 aa10.59□□□□□ -0.71
YNL228WYNL228W ABP1P15891 592 aaKnown RBP10.56□□□□□ -0.72
Retrieved 100 of 5,963 RNA–protein pairs in 70.4 ms