RNA–Protein interactions for RNA: YPL027W

SMA1, Transcript of Protein of unknown function involved in prospore membrane assembly, yeastyeast

Gene SMA1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMA1YPL027W MTC1P47018 478 aaKnown RBP15.55■□□□□ 0.08
SMA1YPL027W DRS1P32892 752 aaKnown RBP15.23■□□□□ 0.03
SMA1YPL027W FAP1P53971 965 aa13.42□□□□□ -0.26
SMA1YPL027W DIP2Q12220 943 aaPredicted RBP13.1□□□□□ -0.31
SMA1YPL027W BFR2Q06631 534 aaKnown RBP12.98□□□□□ -0.33
SMA1YPL027W ISW2Q08773 1120 aa12.81□□□□□ -0.36
SMA1YPL027W AVT3P36062 692 aa12.75□□□□□ -0.37
SMA1YPL027W PRI1P10363 409 aa12.74□□□□□ -0.37
SMA1YPL027W RPG1P38249 964 aaKnown RBP12.63□□□□□ -0.39
SMA1YPL027W PRY3P47033 881 aa12.63□□□□□ -0.39
SMA1YPL027W AAD16Q02895 342 aa12.61□□□□□ -0.39
SMA1YPL027W RSE1Q04693 1361 aaKnown RBP12.5□□□□□ -0.41
SMA1YPL027W TSR3Q12094 313 aaKnown RBP12.12□□□□□ -0.47
SMA1YPL027W RPL17AP05740 184 aaKnown RBP12.06□□□□□ -0.48
SMA1YPL027W RPL17BP46990 184 aaKnown RBP12.06□□□□□ -0.48
SMA1YPL027W REB1P21538 810 aa11.98□□□□□ -0.49
SMA1YPL027W YCK3P39962 524 aa11.86□□□□□ -0.51
SMA1YPL027W TFA1P36100 482 aa11.84□□□□□ -0.51
SMA1YPL027W HAA1Q12753 694 aaKnown RBP11.75□□□□□ -0.53
SMA1YPL027W MRPL32P25348 183 aa11.67□□□□□ -0.54
SMA1YPL027W SPT21P35209 758 aa11.51□□□□□ -0.57
SMA1YPL027W RIM101P33400 625 aa11.26□□□□□ -0.61
SMA1YPL027W YKR023WP36119 530 aaKnown RBP11.25□□□□□ -0.61
SMA1YPL027W CDC27P38042 758 aa11.13□□□□□ -0.63
SMA1YPL027W HOP09932 586 aa11.07□□□□□ -0.64
SMA1YPL027W TFC8Q12308 588 aa11.04□□□□□ -0.64
SMA1YPL027W DCD1P06773 312 aa10.99□□□□□ -0.65
SMA1YPL027W YGL015CP33199 130 aa10.99□□□□□ -0.65
SMA1YPL027W OXP1P28273 1286 aa10.9□□□□□ -0.66
SMA1YPL027W YIL055CP40523 627 aaKnown RBP10.84□□□□□ -0.67
SMA1YPL027W PTP3P40048 928 aa10.81□□□□□ -0.68
SMA1YPL027W YAH1Q12184 172 aaKnown RBP10.76□□□□□ -0.69
SMA1YPL027W UBP10P53874 792 aaPredicted RBP10.74□□□□□ -0.69
SMA1YPL027W MAP2P38174 421 aaKnown RBP10.73□□□□□ -0.69
SMA1YPL027W BCH2P36122 765 aa10.7□□□□□ -0.7
SMA1YPL027W SCY1P53009 804 aa10.66□□□□□ -0.7
SMA1YPL027W RSM7P47150 247 aa10.63□□□□□ -0.71
SMA1YPL027W SSP1P38871 571 aa10.6□□□□□ -0.71
SMA1YPL027W YLR271WQ06152 274 aa10.54□□□□□ -0.72
SMA1YPL027W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.52□□□□□ -0.73not detected
SMA1YPL027W EPS1P40557 701 aa10.5□□□□□ -0.73
SMA1YPL027W AI2P03876 854 aa10.48□□□□□ -0.73
SMA1YPL027W SLX5P32828 619 aaKnown RBP10.48□□□□□ -0.73
SMA1YPL027W BBC1P47068 1157 aa10.48□□□□□ -0.73
SMA1YPL027W BDF1P35817 686 aa10.42□□□□□ -0.74
SMA1YPL027W TIF4632P39936 914 aaKnown RBP10.36□□□□□ -0.75
SMA1YPL027W PSD2P53037 1138 aaKnown RBP10.3□□□□□ -0.76
SMA1YPL027W MGA2P40578 1113 aa10.28□□□□□ -0.76
SMA1YPL027W TGL3P40308 642 aa10.25□□□□□ -0.77
SMA1YPL027W CST9Q06032 482 aa10.2□□□□□ -0.78
SMA1YPL027W MRM1P25270 412 aa10.14□□□□□ -0.79
SMA1YPL027W BUD31P25337 157 aaPredicted RBP10.07□□□□□ -0.8
SMA1YPL027W RTG3P38165 486 aa9.98□□□□□ -0.81
SMA1YPL027W YAP5P40574 245 aa9.96□□□□□ -0.82
SMA1YPL027W NSR1P27476 414 aaKnown RBP RIP-Chip data9.95□□□□□ -0.82not detected
SMA1YPL027W YOR238WQ08634 303 aa9.93□□□□□ -0.82
SMA1YPL027W RCR1P38212 213 aa9.89□□□□□ -0.83
SMA1YPL027W VPS29P38759 282 aa9.85□□□□□ -0.83
SMA1YPL027W YMR1P47147 688 aaKnown RBP RIP-Chip data9.85□□□□□ -0.83not detected
SMA1YPL027W MST1P07236 462 aa9.84□□□□□ -0.83
SMA1YPL027W PIB1Q06651 286 aa9.83□□□□□ -0.84
SMA1YPL027W UBP9P39967 754 aa9.8□□□□□ -0.84
SMA1YPL027W DBP1P24784 617 aaKnown RBP9.79□□□□□ -0.84
SMA1YPL027W GTT3P39996 337 aa9.77□□□□□ -0.85
SMA1YPL027W YFR006WP43590 535 aa9.77□□□□□ -0.85
SMA1YPL027W RAM2P29703 316 aa9.76□□□□□ -0.85
SMA1YPL027W STS1P38637 319 aa9.74□□□□□ -0.85
SMA1YPL027W MAK11P20484 414 aaKnown RBP9.67□□□□□ -0.86
SMA1YPL027W WSC3Q12215 556 aa9.65□□□□□ -0.86
SMA1YPL027W RQC2Q12532 1038 aaKnown RBP9.65□□□□□ -0.86
SMA1YPL027W YBL029C-AQ3E756 94 aa9.65□□□□□ -0.86
SMA1YPL027W VMA1P17255 1071 aaKnown RBP9.62□□□□□ -0.87
SMA1YPL027W DMA1P38823 416 aa9.62□□□□□ -0.87
SMA1YPL027W SIS1P25294 352 aaKnown RBP9.6□□□□□ -0.87
SMA1YPL027W MIF2P35201 549 aa9.59□□□□□ -0.87
SMA1YPL027W VNX1P42839 908 aa9.56□□□□□ -0.88
SMA1YPL027W COQ8P27697 501 aa9.54□□□□□ -0.88
SMA1YPL027W SPP1Q03012 353 aa9.53□□□□□ -0.88
SMA1YPL027W SET4P42948 560 aa9.51□□□□□ -0.89
SMA1YPL027W YOL036WQ08206 761 aa9.51□□□□□ -0.89
SMA1YPL027W SAM3Q08986 587 aa9.51□□□□□ -0.89
SMA1YPL027W SET1P38827 1080 aaKnown RBP9.49□□□□□ -0.89
SMA1YPL027W MSB4Q12317 492 aa9.49□□□□□ -0.89
SMA1YPL027W EDS1P38073 919 aa9.48□□□□□ -0.89
SMA1YPL027W GYP5Q12344 894 aa9.47□□□□□ -0.89
SMA1YPL027W TIF11P38912 153 aaKnown RBP9.46□□□□□ -0.9
SMA1YPL027W PTC3P34221 468 aaKnown RBP9.45□□□□□ -0.9
SMA1YPL027W EAP1P36041 632 aaKnown RBP9.43□□□□□ -0.9
SMA1YPL027W GRE2Q12068 342 aaKnown RBP9.43□□□□□ -0.9
SMA1YPL027W ULI1P43604 169 aa9.42□□□□□ -0.9
SMA1YPL027W ATH1P48016 1211 aa9.41□□□□□ -0.9
SMA1YPL027W NOP53Q12080 455 aaKnown RBP9.41□□□□□ -0.9
SMA1YPL027W ABP1P15891 592 aaKnown RBP9.4□□□□□ -0.9
SMA1YPL027W DCW1P36091 449 aa9.38□□□□□ -0.91
SMA1YPL027W TRP5P00931 707 aaKnown RBP9.35□□□□□ -0.91
SMA1YPL027W HTA1P04911 132 aaKnown RBP9.35□□□□□ -0.91
SMA1YPL027W HTA2P04912 132 aa9.35□□□□□ -0.91
SMA1YPL027W GUT1P32190 709 aa9.35□□□□□ -0.91
SMA1YPL027W IFH1P39520 1085 aa9.32□□□□□ -0.92
SMA1YPL027W IOC2Q12072 812 aa9.32□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms