RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeastyeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB2YDR062W DRS1P32892 752 aaKnown RBP12.51□□□□□ -0.41
LCB2YDR062W MTC1P47018 478 aaKnown RBP11.47□□□□□ -0.57
LCB2YDR062W TFA1P36100 482 aa11.26□□□□□ -0.61
LCB2YDR062W BFR2Q06631 534 aaKnown RBP11.25□□□□□ -0.61
LCB2YDR062W RQC2Q12532 1038 aaKnown RBP10.57□□□□□ -0.72
LCB2YDR062W AVT3P36062 692 aa10.44□□□□□ -0.74
LCB2YDR062W DIP2Q12220 943 aaPredicted RBP10.31□□□□□ -0.76
LCB2YDR062W TAF7Q05021 590 aa9.85□□□□□ -0.83
LCB2YDR062W FAP1P53971 965 aa9.82□□□□□ -0.84
LCB2YDR062W DMA1P38823 416 aa9.64□□□□□ -0.87
LCB2YDR062W RSE1Q04693 1361 aaKnown RBP9.46□□□□□ -0.9
LCB2YDR062W LEO1P38439 464 aa9.3□□□□□ -0.92
LCB2YDR062W PRY3P47033 881 aa9.28□□□□□ -0.92
LCB2YDR062W PTP3P40048 928 aa9.2□□□□□ -0.94
LCB2YDR062W ISW2Q08773 1120 aa9.11□□□□□ -0.95
LCB2YDR062W RPL17AP05740 184 aaKnown RBP9.04□□□□□ -0.96
LCB2YDR062W RPL17BP46990 184 aaKnown RBP9.04□□□□□ -0.96
LCB2YDR062W RPG1P38249 964 aaKnown RBP8.95□□□□□ -0.98
LCB2YDR062W SSP1P38871 571 aa8.92□□□□□ -0.98
LCB2YDR062W LEU3P08638 886 aa8.91□□□□□ -0.98
LCB2YDR062W PRI1P10363 409 aa8.91□□□□□ -0.98
LCB2YDR062W RIM101P33400 625 aa8.88□□□□□ -0.99
LCB2YDR062W REB1P21538 810 aa8.85□□□□□ -0.99
LCB2YDR062W SAS10Q12136 610 aaPredicted RBP8.82□□□□□ -1
LCB2YDR062W AAD16Q02895 342 aa8.81□□□□□ -1
LCB2YDR062W SPT21P35209 758 aa8.8□□□□□ -1
LCB2YDR062W YCK3P39962 524 aa8.78□□□□□ -1
LCB2YDR062W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
LCB2YDR062W HAA1Q12753 694 aaKnown RBP8.65□□□□□ -1.02
LCB2YDR062W YAH1Q12184 172 aaKnown RBP8.64□□□□□ -1.03
LCB2YDR062W OXP1P28273 1286 aa8.63□□□□□ -1.03
LCB2YDR062W DMA2P53924 522 aa8.59□□□□□ -1.03
LCB2YDR062W YLR271WQ06152 274 aa8.57□□□□□ -1.04
LCB2YDR062W RPN1P38764 993 aaKnown RBP8.56□□□□□ -1.04
LCB2YDR062W MGA2P40578 1113 aa8.51□□□□□ -1.05
LCB2YDR062W YIL055CP40523 627 aaKnown RBP8.5□□□□□ -1.05
LCB2YDR062W TSR3Q12094 313 aaKnown RBP8.45□□□□□ -1.06
LCB2YDR062W RLF2Q12495 606 aa8.42□□□□□ -1.06
LCB2YDR062W ABP1P15891 592 aaKnown RBP8.4□□□□□ -1.06
LCB2YDR062W RSM7P47150 247 aa8.37□□□□□ -1.07
LCB2YDR062W CST9Q06032 482 aa8.37□□□□□ -1.07
LCB2YDR062W CKB1P43639 278 aa8.35□□□□□ -1.07
LCB2YDR062W SPB4P25808 606 aaPredicted RBP8.33□□□□□ -1.08
LCB2YDR062W YKR023WP36119 530 aaKnown RBP8.28□□□□□ -1.08
LCB2YDR062W PSD2P53037 1138 aaKnown RBP8.24□□□□□ -1.09
LCB2YDR062W SET1P38827 1080 aaKnown RBP8.24□□□□□ -1.09
LCB2YDR062W YPR148CQ06523 435 aa8.24□□□□□ -1.09
LCB2YDR062W VPS70P47161 811 aa8.23□□□□□ -1.09
LCB2YDR062W RAM2P29703 316 aa8.19□□□□□ -1.1
LCB2YDR062W IFH1P39520 1085 aa8.18□□□□□ -1.1
LCB2YDR062W AI2P03876 854 aa8.16□□□□□ -1.1
LCB2YDR062W DSF2P38213 736 aa8.13□□□□□ -1.11
LCB2YDR062W KIN1P13185 1064 aa8.12□□□□□ -1.11
LCB2YDR062W TFC8Q12308 588 aa8.12□□□□□ -1.11
LCB2YDR062W HOP09932 586 aa8.11□□□□□ -1.11
LCB2YDR062W MRPL32P25348 183 aa8.11□□□□□ -1.11
LCB2YDR062W HGH1P48362 394 aaKnown RBP8.1□□□□□ -1.11
LCB2YDR062W YNR021WP53723 404 aaKnown RBP8.09□□□□□ -1.11
LCB2YDR062W PBS2P08018 668 aa8.06□□□□□ -1.12
LCB2YDR062W BBC1P47068 1157 aa8.05□□□□□ -1.12
LCB2YDR062W DCD1P06773 312 aa8.03□□□□□ -1.12
LCB2YDR062W AIM7Q12156 149 aa8.02□□□□□ -1.13
LCB2YDR062W GLC3P32775 704 aa8.01□□□□□ -1.13
LCB2YDR062W RCR1P38212 213 aa7.99□□□□□ -1.13
LCB2YDR062W AIM44Q99299 758 aa7.98□□□□□ -1.13
LCB2YDR062W MAK11P20484 414 aaKnown RBP7.97□□□□□ -1.13
LCB2YDR062W MAM3Q12296 706 aa7.97□□□□□ -1.13
LCB2YDR062W MRM1P25270 412 aa7.96□□□□□ -1.13
LCB2YDR062W GUA1P38625 525 aaKnown RBP7.93□□□□□ -1.14
LCB2YDR062W YML020WQ03722 664 aa7.93□□□□□ -1.14
LCB2YDR062W BCH2P36122 765 aa7.92□□□□□ -1.14
LCB2YDR062W IES2P40154 320 aa7.92□□□□□ -1.14
LCB2YDR062W RTG3P38165 486 aa7.91□□□□□ -1.14
LCB2YDR062W DIT2P21595 489 aa7.89□□□□□ -1.15
LCB2YDR062W NUP42P49686 430 aaKnown RBP7.89□□□□□ -1.15
LCB2YDR062W MAK21Q12176 1025 aaKnown RBP7.89□□□□□ -1.15
LCB2YDR062W NOP8Q08287 484 aaPredicted RBP7.88□□□□□ -1.15
LCB2YDR062W CDC27P38042 758 aa7.87□□□□□ -1.15
LCB2YDR062W HPC2Q01448 625 aa7.87□□□□□ -1.15
LCB2YDR062W EPS1P40557 701 aa7.86□□□□□ -1.15
LCB2YDR062W REF2P42073 533 aaPredicted RBP7.86□□□□□ -1.15
LCB2YDR062W COQ8P27697 501 aa7.86□□□□□ -1.15
LCB2YDR062W SSA1P10591 642 aaKnown RBP7.85□□□□□ -1.15
LCB2YDR062W GEF1P37020 779 aa7.83□□□□□ -1.16
LCB2YDR062W SLX8P40072 274 aa7.83□□□□□ -1.16
LCB2YDR062W ATF2P53296 535 aa7.83□□□□□ -1.16
LCB2YDR062W TFB3Q03290 321 aa7.82□□□□□ -1.16
LCB2YDR062W NOP53Q12080 455 aaKnown RBP7.82□□□□□ -1.16
LCB2YDR062W ORC1P54784 914 aaPredicted RBP7.8□□□□□ -1.16
LCB2YDR062W YGL015CP33199 130 aa7.79□□□□□ -1.16
LCB2YDR062W SUB2Q07478 446 aaKnown RBP7.79□□□□□ -1.16
LCB2YDR062W BDF1P35817 686 aa7.77□□□□□ -1.17
LCB2YDR062W NAP1P25293 417 aaKnown RBP7.76□□□□□ -1.17
LCB2YDR062W BRL1P38770 471 aa7.76□□□□□ -1.17
LCB2YDR062W COX6P00427 148 aa7.75□□□□□ -1.17
LCB2YDR062W VPS29P38759 282 aa7.73□□□□□ -1.17
LCB2YDR062W MIF2P35201 549 aa7.72□□□□□ -1.17
LCB2YDR062W PKC1P24583 1151 aa7.71□□□□□ -1.18
LCB2YDR062W EDS1P38073 919 aa7.7□□□□□ -1.18
LCB2YDR062W SSA2P10592 639 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms