RNA–Protein interactions for RNA: YDR246W

TRS23, Transcript of Core component of transport protein particle (TRAPP) complexes I-III, yeastyeast

Gene TRS23, Length 660 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRS23YDR246W MTC1P47018 478 aaKnown RBP15.42■□□□□ 0.06
TRS23YDR246W DRS1P32892 752 aaKnown RBP15.03■□□□□ -0
TRS23YDR246W FAP1P53971 965 aa13.24□□□□□ -0.29
TRS23YDR246W DIP2Q12220 943 aaPredicted RBP12.93□□□□□ -0.34
TRS23YDR246W BFR2Q06631 534 aaKnown RBP12.79□□□□□ -0.36
TRS23YDR246W ISW2Q08773 1120 aa12.67□□□□□ -0.38
TRS23YDR246W PRI1P10363 409 aa12.65□□□□□ -0.38
TRS23YDR246W AVT3P36062 692 aa12.62□□□□□ -0.39
TRS23YDR246W RPG1P38249 964 aaKnown RBP12.51□□□□□ -0.41
TRS23YDR246W AAD16Q02895 342 aa12.5□□□□□ -0.41
TRS23YDR246W PRY3P47033 881 aa12.4□□□□□ -0.42
TRS23YDR246W RSE1Q04693 1361 aaKnown RBP12.36□□□□□ -0.43
TRS23YDR246W TSR3Q12094 313 aaKnown RBP12.01□□□□□ -0.49
TRS23YDR246W RPL17AP05740 184 aaKnown RBP11.94□□□□□ -0.5
TRS23YDR246W RPL17BP46990 184 aaKnown RBP11.94□□□□□ -0.5
TRS23YDR246W REB1P21538 810 aa11.85□□□□□ -0.51
TRS23YDR246W TFA1P36100 482 aa11.66□□□□□ -0.54
TRS23YDR246W YCK3P39962 524 aa11.65□□□□□ -0.54
TRS23YDR246W HAA1Q12753 694 aaKnown RBP11.65□□□□□ -0.54
TRS23YDR246W MRPL32P25348 183 aa11.55□□□□□ -0.56
TRS23YDR246W SPT21P35209 758 aa11.42□□□□□ -0.58
TRS23YDR246W RIM101P33400 625 aa11.15□□□□□ -0.62
TRS23YDR246W YKR023WP36119 530 aaKnown RBP11.15□□□□□ -0.62
TRS23YDR246W CDC27P38042 758 aa11.05□□□□□ -0.64
TRS23YDR246W HOP09932 586 aa10.95□□□□□ -0.66
TRS23YDR246W TFC8Q12308 588 aa10.94□□□□□ -0.66
TRS23YDR246W DCD1P06773 312 aa10.89□□□□□ -0.67
TRS23YDR246W YGL015CP33199 130 aa10.89□□□□□ -0.67
TRS23YDR246W OXP1P28273 1286 aa10.79□□□□□ -0.68
TRS23YDR246W YIL055CP40523 627 aaKnown RBP10.69□□□□□ -0.7
TRS23YDR246W UBP10P53874 792 aaPredicted RBP10.68□□□□□ -0.7
TRS23YDR246W PTP3P40048 928 aa10.66□□□□□ -0.7
TRS23YDR246W MAP2P38174 421 aaKnown RBP10.65□□□□□ -0.7
TRS23YDR246W YAH1Q12184 172 aaKnown RBP10.62□□□□□ -0.71
TRS23YDR246W BCH2P36122 765 aa10.6□□□□□ -0.71
TRS23YDR246W SCY1P53009 804 aa10.56□□□□□ -0.72
TRS23YDR246W RSM7P47150 247 aa10.5□□□□□ -0.73
TRS23YDR246W SSP1P38871 571 aa10.46□□□□□ -0.73
TRS23YDR246W YLR271WQ06152 274 aa10.42□□□□□ -0.74
TRS23YDR246W EPS1P40557 701 aa10.4□□□□□ -0.74
TRS23YDR246W SLX5P32828 619 aaKnown RBP10.39□□□□□ -0.75
TRS23YDR246W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.37□□□□□ -0.75not detected
TRS23YDR246W AI2P03876 854 aa10.36□□□□□ -0.75
TRS23YDR246W BBC1P47068 1157 aa10.35□□□□□ -0.75
TRS23YDR246W BDF1P35817 686 aa10.33□□□□□ -0.76
TRS23YDR246W TIF4632P39936 914 aaKnown RBP10.26□□□□□ -0.77
TRS23YDR246W PSD2P53037 1138 aaKnown RBP10.2□□□□□ -0.78
TRS23YDR246W TGL3P40308 642 aa10.16□□□□□ -0.78
TRS23YDR246W MGA2P40578 1113 aa10.14□□□□□ -0.79
TRS23YDR246W CST9Q06032 482 aa10.09□□□□□ -0.79
TRS23YDR246W MRM1P25270 412 aa10.03□□□□□ -0.8
TRS23YDR246W NSR1P27476 414 aaKnown RBP RIP-Chip data9.9□□□□□ -0.82not detected
TRS23YDR246W YAP5P40574 245 aa9.86□□□□□ -0.83
TRS23YDR246W RTG3P38165 486 aa9.85□□□□□ -0.83
TRS23YDR246W YOR238WQ08634 303 aa9.84□□□□□ -0.83
TRS23YDR246W RCR1P38212 213 aa9.78□□□□□ -0.84
TRS23YDR246W MST1P07236 462 aa9.77□□□□□ -0.85
TRS23YDR246W VPS29P38759 282 aa9.75□□□□□ -0.85
TRS23YDR246W YMR1P47147 688 aaKnown RBP RIP-Chip data9.74□□□□□ -0.85not detected
TRS23YDR246W PIB1Q06651 286 aa9.71□□□□□ -0.86
TRS23YDR246W BUD31P25337 157 aaPredicted RBP9.7□□□□□ -0.86
TRS23YDR246W UBP9P39967 754 aa9.7□□□□□ -0.86
TRS23YDR246W DBP1P24784 617 aaKnown RBP9.68□□□□□ -0.86
TRS23YDR246W GTT3P39996 337 aa9.66□□□□□ -0.86
TRS23YDR246W YFR006WP43590 535 aa9.66□□□□□ -0.86
TRS23YDR246W RAM2P29703 316 aa9.65□□□□□ -0.86
TRS23YDR246W STS1P38637 319 aa9.65□□□□□ -0.86
TRS23YDR246W YBL029C-AQ3E756 94 aa9.57□□□□□ -0.88
TRS23YDR246W MAK11P20484 414 aaKnown RBP9.56□□□□□ -0.88
TRS23YDR246W WSC3Q12215 556 aa9.55□□□□□ -0.88
TRS23YDR246W VMA1P17255 1071 aaKnown RBP9.53□□□□□ -0.88
TRS23YDR246W VNX1P42839 908 aa9.48□□□□□ -0.89
TRS23YDR246W MIF2P35201 549 aa9.46□□□□□ -0.9
TRS23YDR246W DMA1P38823 416 aa9.43□□□□□ -0.9
TRS23YDR246W SPP1Q03012 353 aa9.43□□□□□ -0.9
TRS23YDR246W YOL036WQ08206 761 aa9.43□□□□□ -0.9
TRS23YDR246W SAM3Q08986 587 aa9.43□□□□□ -0.9
TRS23YDR246W COQ8P27697 501 aa9.42□□□□□ -0.9
TRS23YDR246W MSB4Q12317 492 aa9.41□□□□□ -0.9
TRS23YDR246W SET4P42948 560 aa9.4□□□□□ -0.9
TRS23YDR246W RQC2Q12532 1038 aaKnown RBP9.4□□□□□ -0.9
TRS23YDR246W EDS1P38073 919 aa9.39□□□□□ -0.91
TRS23YDR246W TIF11P38912 153 aaKnown RBP9.39□□□□□ -0.91
TRS23YDR246W GYP5Q12344 894 aa9.35□□□□□ -0.91
TRS23YDR246W PTC3P34221 468 aaKnown RBP9.34□□□□□ -0.91
TRS23YDR246W SET1P38827 1080 aaKnown RBP9.34□□□□□ -0.91
TRS23YDR246W SIS1P25294 352 aaKnown RBP9.33□□□□□ -0.92
TRS23YDR246W EAP1P36041 632 aaKnown RBP9.33□□□□□ -0.92
TRS23YDR246W ULI1P43604 169 aa9.33□□□□□ -0.92
TRS23YDR246W GRE2Q12068 342 aaKnown RBP9.32□□□□□ -0.92
TRS23YDR246W ABP1P15891 592 aaKnown RBP9.3□□□□□ -0.92
TRS23YDR246W ATH1P48016 1211 aa9.29□□□□□ -0.92
TRS23YDR246W NOP53Q12080 455 aaKnown RBP9.29□□□□□ -0.92
TRS23YDR246W TRP5P00931 707 aaKnown RBP9.27□□□□□ -0.93
TRS23YDR246W DCW1P36091 449 aa9.27□□□□□ -0.93
TRS23YDR246W HTA1P04911 132 aaKnown RBP9.26□□□□□ -0.93
TRS23YDR246W HTA2P04912 132 aa9.26□□□□□ -0.93
TRS23YDR246W IOC2Q12072 812 aa9.25□□□□□ -0.93
TRS23YDR246W GUT1P32190 709 aa9.24□□□□□ -0.93
TRS23YDR246W LDB19Q12502 818 aa9.24□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms