RNA–Protein interactions for RNA: YOR361C

PRT1, Transcript of eIF3b subunit of the eukaryotic translation initiation factor 3 (eIF3), yeastyeast

Gene PRT1, Length 2,292 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRT1YOR361C DRS1P32892 752 aaKnown RBP11.7□□□□□ -0.54
PRT1YOR361C TFA1P36100 482 aa10.78□□□□□ -0.68
PRT1YOR361C MTC1P47018 478 aaKnown RBP10.6□□□□□ -0.71
PRT1YOR361C BFR2Q06631 534 aaKnown RBP10.58□□□□□ -0.72
PRT1YOR361C RQC2Q12532 1038 aaKnown RBP10.08□□□□□ -0.8
PRT1YOR361C AVT3P36062 692 aa9.85□□□□□ -0.83
PRT1YOR361C TAF7Q05021 590 aa9.7□□□□□ -0.86
PRT1YOR361C DIP2Q12220 943 aaPredicted RBP9.61□□□□□ -0.87
PRT1YOR361C DMA1P38823 416 aa9.28□□□□□ -0.92
PRT1YOR361C LEO1P38439 464 aa9.03□□□□□ -0.96
PRT1YOR361C RSE1Q04693 1361 aaKnown RBP8.72□□□□□ -1.01
PRT1YOR361C PTP3P40048 928 aa8.66□□□□□ -1.02
PRT1YOR361C LEU3P08638 886 aa8.59□□□□□ -1.03
PRT1YOR361C SAS10Q12136 610 aaPredicted RBP8.5□□□□□ -1.05
PRT1YOR361C SSP1P38871 571 aa8.39□□□□□ -1.07
PRT1YOR361C DMA2P53924 522 aa8.34□□□□□ -1.07
PRT1YOR361C RPL17AP05740 184 aaKnown RBP8.34□□□□□ -1.07
PRT1YOR361C RPL17BP46990 184 aaKnown RBP8.34□□□□□ -1.07
PRT1YOR361C ABP1P15891 592 aaKnown RBP8.33□□□□□ -1.08
PRT1YOR361C RIM101P33400 625 aa8.32□□□□□ -1.08
PRT1YOR361C ISW2Q08773 1120 aa8.29□□□□□ -1.08
PRT1YOR361C SPT21P35209 758 aa8.24□□□□□ -1.09
PRT1YOR361C RPG1P38249 964 aaKnown RBP8.2□□□□□ -1.1
PRT1YOR361C RPN1P38764 993 aaKnown RBP8.2□□□□□ -1.1
PRT1YOR361C RLF2Q12495 606 aa8.15□□□□□ -1.1
PRT1YOR361C OXP1P28273 1286 aa8.13□□□□□ -1.11
PRT1YOR361C IFH1P39520 1085 aa8.1□□□□□ -1.11
PRT1YOR361C REB1P21538 810 aa8.09□□□□□ -1.11
PRT1YOR361C YLR271WQ06152 274 aa8.08□□□□□ -1.12
PRT1YOR361C ARP8Q12386 881 aaKnown RBP RIP-Chip data8.07□□□□□ -1.12not detected
PRT1YOR361C YAH1Q12184 172 aaKnown RBP8.05□□□□□ -1.12
PRT1YOR361C CKB1P43639 278 aa8.02□□□□□ -1.13
PRT1YOR361C MGA2P40578 1113 aa7.98□□□□□ -1.13
PRT1YOR361C PRI1P10363 409 aa7.91□□□□□ -1.14
PRT1YOR361C CST9Q06032 482 aa7.9□□□□□ -1.14
PRT1YOR361C SPB4P25808 606 aaPredicted RBP7.87□□□□□ -1.15
PRT1YOR361C ORC1P54784 914 aaPredicted RBP7.87□□□□□ -1.15
PRT1YOR361C NAP1P25293 417 aaKnown RBP7.85□□□□□ -1.15
PRT1YOR361C YIL055CP40523 627 aaKnown RBP7.85□□□□□ -1.15
PRT1YOR361C YPR148CQ06523 435 aa7.84□□□□□ -1.15
PRT1YOR361C AIM44Q99299 758 aa7.83□□□□□ -1.16
PRT1YOR361C IOC4Q04213 475 aa7.81□□□□□ -1.16
PRT1YOR361C RSM7P47150 247 aa7.79□□□□□ -1.16
PRT1YOR361C SET1P38827 1080 aaKnown RBP7.78□□□□□ -1.16
PRT1YOR361C VPS70P47161 811 aa7.78□□□□□ -1.16
PRT1YOR361C KIN1P13185 1064 aa7.77□□□□□ -1.17
PRT1YOR361C YML020WQ03722 664 aa7.76□□□□□ -1.17
PRT1YOR361C DSF2P38213 736 aa7.76□□□□□ -1.17
PRT1YOR361C NOP8Q08287 484 aaPredicted RBP7.76□□□□□ -1.17
PRT1YOR361C RAM2P29703 316 aa7.75□□□□□ -1.17
PRT1YOR361C PSD2P53037 1138 aaKnown RBP7.75□□□□□ -1.17
PRT1YOR361C YKR023WP36119 530 aaKnown RBP7.72□□□□□ -1.17
PRT1YOR361C YNR021WP53723 404 aaKnown RBP7.7□□□□□ -1.18
PRT1YOR361C AIM7Q12156 149 aa7.64□□□□□ -1.19
PRT1YOR361C PBS2P08018 668 aa7.64□□□□□ -1.19
PRT1YOR361C GLC3P32775 704 aa7.63□□□□□ -1.19
PRT1YOR361C GUA1P38625 525 aaKnown RBP7.63□□□□□ -1.19
PRT1YOR361C SLX8P40072 274 aa7.62□□□□□ -1.19
PRT1YOR361C HGH1P48362 394 aaKnown RBP7.62□□□□□ -1.19
PRT1YOR361C AI2P03876 854 aa7.59□□□□□ -1.19
PRT1YOR361C SSA1P10591 642 aaKnown RBP7.58□□□□□ -1.2
PRT1YOR361C GEF1P37020 779 aa7.58□□□□□ -1.2
PRT1YOR361C RCR1P38212 213 aa7.56□□□□□ -1.2
PRT1YOR361C AAD16Q02895 342 aa7.56□□□□□ -1.2
PRT1YOR361C SUB2Q07478 446 aaKnown RBP7.55□□□□□ -1.2
PRT1YOR361C MAM3Q12296 706 aa7.55□□□□□ -1.2
PRT1YOR361C NUP42P49686 430 aaKnown RBP7.55□□□□□ -1.2
PRT1YOR361C TSR3Q12094 313 aaKnown RBP7.55□□□□□ -1.2
PRT1YOR361C DIT2P21595 489 aa7.54□□□□□ -1.2
PRT1YOR361C TFC8Q12308 588 aa7.53□□□□□ -1.2
PRT1YOR361C HPC2Q01448 625 aa7.52□□□□□ -1.21
PRT1YOR361C HOP09932 586 aa7.51□□□□□ -1.21
PRT1YOR361C IES2P40154 320 aa7.5□□□□□ -1.21
PRT1YOR361C MRX12P47084 519 aa7.49□□□□□ -1.21
PRT1YOR361C TFB3Q03290 321 aa7.48□□□□□ -1.21
PRT1YOR361C MAK11P20484 414 aaKnown RBP7.48□□□□□ -1.21
PRT1YOR361C DCD1P06773 312 aa7.46□□□□□ -1.22
PRT1YOR361C MAK21Q12176 1025 aaKnown RBP7.45□□□□□ -1.22
PRT1YOR361C PKC1P24583 1151 aa7.43□□□□□ -1.22
PRT1YOR361C NOP7P53261 605 aaKnown RBP7.43□□□□□ -1.22
PRT1YOR361C MRM1P25270 412 aa7.41□□□□□ -1.22
PRT1YOR361C GLN1P32288 370 aaKnown RBP7.4□□□□□ -1.22
PRT1YOR361C REF2P42073 533 aaPredicted RBP7.4□□□□□ -1.23
PRT1YOR361C BBC1P47068 1157 aa7.39□□□□□ -1.23
PRT1YOR361C PAM1P37304 830 aaKnown RBP7.39□□□□□ -1.23
PRT1YOR361C COQ8P27697 501 aa7.38□□□□□ -1.23
PRT1YOR361C ATF2P53296 535 aa7.37□□□□□ -1.23
PRT1YOR361C BCH2P36122 765 aa7.36□□□□□ -1.23
PRT1YOR361C RTG3P38165 486 aa7.36□□□□□ -1.23
PRT1YOR361C BIM1P40013 344 aa7.36□□□□□ -1.23
PRT1YOR361C SNU71P53207 620 aaKnown RBP7.36□□□□□ -1.23
PRT1YOR361C FAP1P53971 965 aa7.35□□□□□ -1.23
PRT1YOR361C ATG32P40458 529 aa7.35□□□□□ -1.23
PRT1YOR361C BRL1P38770 471 aa7.34□□□□□ -1.23
PRT1YOR361C COX6P00427 148 aa7.34□□□□□ -1.24
PRT1YOR361C SSA4P22202 642 aaKnown RBP7.33□□□□□ -1.24
PRT1YOR361C SEN54Q02825 467 aaPredicted RBP7.32□□□□□ -1.24
PRT1YOR361C NOP53Q12080 455 aaKnown RBP7.32□□□□□ -1.24
PRT1YOR361C SLD2P34252 453 aa7.31□□□□□ -1.24
PRT1YOR361C YJL007CP47080 104 aa7.31□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 662 ms