RNA–Protein interactions for RNA: YMR228W

MTF1, Transcript of Mitochondrial RNA polymerase specificity factor, yeastyeast

Gene MTF1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MTF1YMR228W MTC1P47018 478 aaKnown RBP15.07■□□□□ 0
MTF1YMR228W DRS1P32892 752 aaKnown RBP14.77□□□□□ -0.05
MTF1YMR228W FAP1P53971 965 aa12.97□□□□□ -0.33
MTF1YMR228W DIP2Q12220 943 aaPredicted RBP12.7□□□□□ -0.38
MTF1YMR228W BFR2Q06631 534 aaKnown RBP12.59□□□□□ -0.39
MTF1YMR228W ISW2Q08773 1120 aa12.42□□□□□ -0.42
MTF1YMR228W AVT3P36062 692 aa12.35□□□□□ -0.43
MTF1YMR228W PRI1P10363 409 aa12.34□□□□□ -0.43
MTF1YMR228W RPG1P38249 964 aaKnown RBP12.24□□□□□ -0.45
MTF1YMR228W AAD16Q02895 342 aa12.22□□□□□ -0.45
MTF1YMR228W PRY3P47033 881 aa12.13□□□□□ -0.47
MTF1YMR228W RSE1Q04693 1361 aaKnown RBP12.11□□□□□ -0.47
MTF1YMR228W TFA1P36100 482 aa11.99□□□□□ -0.49
MTF1YMR228W TSR3Q12094 313 aaKnown RBP11.74□□□□□ -0.53
MTF1YMR228W RPL17AP05740 184 aaKnown RBP11.69□□□□□ -0.54
MTF1YMR228W RPL17BP46990 184 aaKnown RBP11.69□□□□□ -0.54
MTF1YMR228W REB1P21538 810 aa11.63□□□□□ -0.55
MTF1YMR228W HAA1Q12753 694 aaKnown RBP11.38□□□□□ -0.59
MTF1YMR228W MRPL32P25348 183 aa11.31□□□□□ -0.6
MTF1YMR228W YCK3P39962 524 aa11.29□□□□□ -0.6
MTF1YMR228W RQC2Q12532 1038 aaKnown RBP11.22□□□□□ -0.61
MTF1YMR228W SPT21P35209 758 aa11.13□□□□□ -0.63
MTF1YMR228W RIM101P33400 625 aa10.91□□□□□ -0.66
MTF1YMR228W YKR023WP36119 530 aaKnown RBP10.89□□□□□ -0.67
MTF1YMR228W CDC27P38042 758 aa10.77□□□□□ -0.69
MTF1YMR228W HOP09932 586 aa10.73□□□□□ -0.69
MTF1YMR228W TFC8Q12308 588 aa10.69□□□□□ -0.7
MTF1YMR228W DCD1P06773 312 aa10.66□□□□□ -0.7
MTF1YMR228W YGL015CP33199 130 aa10.65□□□□□ -0.7
MTF1YMR228W OXP1P28273 1286 aa10.55□□□□□ -0.72
MTF1YMR228W YIL055CP40523 627 aaKnown RBP10.53□□□□□ -0.72
MTF1YMR228W PTP3P40048 928 aa10.49□□□□□ -0.73
MTF1YMR228W YAH1Q12184 172 aaKnown RBP10.45□□□□□ -0.74
MTF1YMR228W UBP10P53874 792 aaPredicted RBP10.42□□□□□ -0.74
MTF1YMR228W MAP2P38174 421 aaKnown RBP10.39□□□□□ -0.75
MTF1YMR228W BCH2P36122 765 aa10.37□□□□□ -0.75
MTF1YMR228W SCY1P53009 804 aa10.33□□□□□ -0.76
MTF1YMR228W RSM7P47150 247 aa10.3□□□□□ -0.76
MTF1YMR228W SSP1P38871 571 aa10.28□□□□□ -0.76
MTF1YMR228W YLR271WQ06152 274 aa10.21□□□□□ -0.77
MTF1YMR228W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.21□□□□□ -0.77not detected
MTF1YMR228W DMA1P38823 416 aa10.19□□□□□ -0.78
MTF1YMR228W TAF7Q05021 590 aa10.19□□□□□ -0.78
MTF1YMR228W EPS1P40557 701 aa10.17□□□□□ -0.78
MTF1YMR228W BBC1P47068 1157 aa10.17□□□□□ -0.78
MTF1YMR228W AI2P03876 854 aa10.16□□□□□ -0.78
MTF1YMR228W SLX5P32828 619 aaKnown RBP10.16□□□□□ -0.78
MTF1YMR228W BDF1P35817 686 aa10.1□□□□□ -0.79
MTF1YMR228W TIF4632P39936 914 aaKnown RBP10.05□□□□□ -0.8
MTF1YMR228W MGA2P40578 1113 aa9.96□□□□□ -0.82
MTF1YMR228W PSD2P53037 1138 aaKnown RBP9.96□□□□□ -0.82
MTF1YMR228W TGL3P40308 642 aa9.93□□□□□ -0.82
MTF1YMR228W CST9Q06032 482 aa9.89□□□□□ -0.83
MTF1YMR228W MRM1P25270 412 aa9.84□□□□□ -0.83
MTF1YMR228W LEO1P38439 464 aa9.78□□□□□ -0.84
MTF1YMR228W RTG3P38165 486 aa9.67□□□□□ -0.86
MTF1YMR228W YAP5P40574 245 aa9.65□□□□□ -0.86
MTF1YMR228W NSR1P27476 414 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
MTF1YMR228W YOR238WQ08634 303 aa9.63□□□□□ -0.87
MTF1YMR228W RCR1P38212 213 aa9.58□□□□□ -0.88
MTF1YMR228W VPS29P38759 282 aa9.54□□□□□ -0.88
MTF1YMR228W YMR1P47147 688 aaKnown RBP RIP-Chip data9.54□□□□□ -0.88not detected
MTF1YMR228W PIB1Q06651 286 aa9.53□□□□□ -0.88
MTF1YMR228W MST1P07236 462 aa9.52□□□□□ -0.89
MTF1YMR228W DBP1P24784 617 aaKnown RBP9.5□□□□□ -0.89
MTF1YMR228W UBP9P39967 754 aa9.5□□□□□ -0.89
MTF1YMR228W GTT3P39996 337 aa9.48□□□□□ -0.89
MTF1YMR228W YFR006WP43590 535 aa9.48□□□□□ -0.89
MTF1YMR228W RAM2P29703 316 aa9.45□□□□□ -0.9
MTF1YMR228W LEU3P08638 886 aa9.44□□□□□ -0.9
MTF1YMR228W BUD31P25337 157 aaPredicted RBP9.43□□□□□ -0.9
MTF1YMR228W STS1P38637 319 aa9.43□□□□□ -0.9
MTF1YMR228W SAS10Q12136 610 aaPredicted RBP9.38□□□□□ -0.91
MTF1YMR228W MAK11P20484 414 aaKnown RBP9.37□□□□□ -0.91
MTF1YMR228W WSC3Q12215 556 aa9.36□□□□□ -0.91
MTF1YMR228W YBL029C-AQ3E756 94 aa9.35□□□□□ -0.91
MTF1YMR228W VMA1P17255 1071 aaKnown RBP9.32□□□□□ -0.92
MTF1YMR228W MIF2P35201 549 aa9.32□□□□□ -0.92
MTF1YMR228W VNX1P42839 908 aa9.26□□□□□ -0.93
MTF1YMR228W COQ8P27697 501 aa9.24□□□□□ -0.93
MTF1YMR228W SPP1Q03012 353 aa9.24□□□□□ -0.93
MTF1YMR228W SET4P42948 560 aa9.23□□□□□ -0.93
MTF1YMR228W YOL036WQ08206 761 aa9.21□□□□□ -0.94
MTF1YMR228W SAM3Q08986 587 aa9.2□□□□□ -0.94
MTF1YMR228W SET1P38827 1080 aaKnown RBP9.19□□□□□ -0.94
MTF1YMR228W MSB4Q12317 492 aa9.19□□□□□ -0.94
MTF1YMR228W EDS1P38073 919 aa9.18□□□□□ -0.94
MTF1YMR228W TIF11P38912 153 aaKnown RBP9.18□□□□□ -0.94
MTF1YMR228W GYP5Q12344 894 aa9.18□□□□□ -0.94
MTF1YMR228W PTC3P34221 468 aaKnown RBP9.15□□□□□ -0.94
MTF1YMR228W EAP1P36041 632 aaKnown RBP9.15□□□□□ -0.94
MTF1YMR228W GRE2Q12068 342 aaKnown RBP9.14□□□□□ -0.95
MTF1YMR228W SIS1P25294 352 aaKnown RBP9.13□□□□□ -0.95
MTF1YMR228W ULI1P43604 169 aa9.13□□□□□ -0.95
MTF1YMR228W ATH1P48016 1211 aa9.13□□□□□ -0.95
MTF1YMR228W RPN1P38764 993 aaKnown RBP9.12□□□□□ -0.95
MTF1YMR228W ABP1P15891 592 aaKnown RBP9.1□□□□□ -0.95
MTF1YMR228W DCW1P36091 449 aa9.1□□□□□ -0.95
MTF1YMR228W NOP53Q12080 455 aaKnown RBP9.1□□□□□ -0.95
MTF1YMR228W TRP5P00931 707 aaKnown RBP9.07□□□□□ -0.96
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms