RNA–Protein interactions for RNA: YKR093W

PTR2, Transcript of Integral membrane peptide transporter, yeastyeast

Gene PTR2, Length 1,806 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR2YKR093W DRS1P32892 752 aaKnown RBP14.36□□□□□ -0.11
PTR2YKR093W MTC1P47018 478 aaKnown RBP13.42□□□□□ -0.26
PTR2YKR093W BFR2Q06631 534 aaKnown RBP12.8□□□□□ -0.36
PTR2YKR093W TFA1P36100 482 aa12.68□□□□□ -0.38
PTR2YKR093W AVT3P36062 692 aa12.04□□□□□ -0.48
PTR2YKR093W DIP2Q12220 943 aaPredicted RBP11.93□□□□□ -0.5
PTR2YKR093W RQC2Q12532 1038 aaKnown RBP11.57□□□□□ -0.56
PTR2YKR093W RSE1Q04693 1361 aaKnown RBP10.99□□□□□ -0.65
PTR2YKR093W DMA1P38823 416 aa10.77□□□□□ -0.69
PTR2YKR093W ISW2Q08773 1120 aa10.68□□□□□ -0.7
PTR2YKR093W TAF7Q05021 590 aa10.64□□□□□ -0.71
PTR2YKR093W RPL17AP05740 184 aaKnown RBP10.54□□□□□ -0.72
PTR2YKR093W RPG1P38249 964 aaKnown RBP10.54□□□□□ -0.72
PTR2YKR093W RPL17BP46990 184 aaKnown RBP10.54□□□□□ -0.72
PTR2YKR093W PTP3P40048 928 aa10.47□□□□□ -0.73
PTR2YKR093W REB1P21538 810 aa10.3□□□□□ -0.76
PTR2YKR093W RIM101P33400 625 aa10.3□□□□□ -0.76
PTR2YKR093W PRI1P10363 409 aa10.28□□□□□ -0.76
PTR2YKR093W SPT21P35209 758 aa10.28□□□□□ -0.76
PTR2YKR093W LEO1P38439 464 aa10.25□□□□□ -0.77
PTR2YKR093W SSP1P38871 571 aa10.21□□□□□ -0.78
PTR2YKR093W OXP1P28273 1286 aa10.03□□□□□ -0.8
PTR2YKR093W FAP1P53971 965 aa9.96□□□□□ -0.82
PTR2YKR093W AAD16Q02895 342 aa9.96□□□□□ -0.82
PTR2YKR093W YAH1Q12184 172 aaKnown RBP9.95□□□□□ -0.82
PTR2YKR093W SAS10Q12136 610 aaPredicted RBP9.94□□□□□ -0.82
PTR2YKR093W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
PTR2YKR093W LEU3P08638 886 aa9.93□□□□□ -0.82
PTR2YKR093W YLR271WQ06152 274 aa9.89□□□□□ -0.83
PTR2YKR093W TSR3Q12094 313 aaKnown RBP9.82□□□□□ -0.84
PTR2YKR093W YIL055CP40523 627 aaKnown RBP9.8□□□□□ -0.84
PTR2YKR093W MGA2P40578 1113 aa9.76□□□□□ -0.85
PTR2YKR093W YKR023WP36119 530 aaKnown RBP9.73□□□□□ -0.85
PTR2YKR093W RSM7P47150 247 aa9.68□□□□□ -0.86
PTR2YKR093W CST9Q06032 482 aa9.64□□□□□ -0.87
PTR2YKR093W RPN1P38764 993 aaKnown RBP9.55□□□□□ -0.88
PTR2YKR093W PSD2P53037 1138 aaKnown RBP9.54□□□□□ -0.88
PTR2YKR093W DMA2P53924 522 aa9.53□□□□□ -0.88
PTR2YKR093W TFC8Q12308 588 aa9.52□□□□□ -0.89
PTR2YKR093W HOP09932 586 aa9.52□□□□□ -0.89
PTR2YKR093W AI2P03876 854 aa9.45□□□□□ -0.9
PTR2YKR093W DCD1P06773 312 aa9.44□□□□□ -0.9
PTR2YKR093W RAM2P29703 316 aa9.41□□□□□ -0.9
PTR2YKR093W MRPL32P25348 183 aa9.38□□□□□ -0.91
PTR2YKR093W SET1P38827 1080 aaKnown RBP9.38□□□□□ -0.91
PTR2YKR093W YPR148CQ06523 435 aa9.37□□□□□ -0.91
PTR2YKR093W ABP1P15891 592 aaKnown RBP9.36□□□□□ -0.91
PTR2YKR093W SPB4P25808 606 aaPredicted RBP9.36□□□□□ -0.91
PTR2YKR093W CKB1P43639 278 aa9.35□□□□□ -0.91
PTR2YKR093W VPS70P47161 811 aa9.33□□□□□ -0.92
PTR2YKR093W CDC27P38042 758 aa9.31□□□□□ -0.92
PTR2YKR093W PRY3P47033 881 aa9.3□□□□□ -0.92
PTR2YKR093W BBC1P47068 1157 aa9.3□□□□□ -0.92
PTR2YKR093W BCH2P36122 765 aa9.28□□□□□ -0.92
PTR2YKR093W RLF2Q12495 606 aa9.27□□□□□ -0.93
PTR2YKR093W IFH1P39520 1085 aa9.26□□□□□ -0.93
PTR2YKR093W RCR1P38212 213 aa9.25□□□□□ -0.93
PTR2YKR093W MRM1P25270 412 aa9.21□□□□□ -0.93
PTR2YKR093W DSF2P38213 736 aa9.2□□□□□ -0.94
PTR2YKR093W EPS1P40557 701 aa9.18□□□□□ -0.94
PTR2YKR093W MAK11P20484 414 aaKnown RBP9.15□□□□□ -0.94
PTR2YKR093W PBS2P08018 668 aa9.13□□□□□ -0.95
PTR2YKR093W KIN1P13185 1064 aa9.12□□□□□ -0.95
PTR2YKR093W RTG3P38165 486 aa9.12□□□□□ -0.95
PTR2YKR093W YNR021WP53723 404 aaKnown RBP9.12□□□□□ -0.95
PTR2YKR093W BDF1P35817 686 aa9.09□□□□□ -0.95
PTR2YKR093W GLC3P32775 704 aa9.03□□□□□ -0.96
PTR2YKR093W COQ8P27697 501 aa9.03□□□□□ -0.96
PTR2YKR093W AIM7Q12156 149 aa9.02□□□□□ -0.97
PTR2YKR093W MAM3Q12296 706 aa9.01□□□□□ -0.97
PTR2YKR093W VPS29P38759 282 aa8.99□□□□□ -0.97
PTR2YKR093W IES2P40154 320 aa8.98□□□□□ -0.97
PTR2YKR093W NUP42P49686 430 aaKnown RBP8.96□□□□□ -0.97
PTR2YKR093W DIT2P21595 489 aa8.96□□□□□ -0.98
PTR2YKR093W NOP53Q12080 455 aaKnown RBP8.96□□□□□ -0.98
PTR2YKR093W REF2P42073 533 aaPredicted RBP8.95□□□□□ -0.98
PTR2YKR093W HGH1P48362 394 aaKnown RBP8.95□□□□□ -0.98
PTR2YKR093W YCK3P39962 524 aa8.94□□□□□ -0.98
PTR2YKR093W SCY1P53009 804 aa8.94□□□□□ -0.98
PTR2YKR093W GUA1P38625 525 aaKnown RBP8.93□□□□□ -0.98
PTR2YKR093W EDS1P38073 919 aa8.89□□□□□ -0.99
PTR2YKR093W MAK21Q12176 1025 aaKnown RBP8.88□□□□□ -0.99
PTR2YKR093W MIF2P35201 549 aa8.87□□□□□ -0.99
PTR2YKR093W STS1P38637 319 aa8.85□□□□□ -0.99
PTR2YKR093W YMR1P47147 688 aaKnown RBP RIP-Chip data8.84□□□□□ -0.99not detected
PTR2YKR093W COX6P00427 148 aa8.83□□□□□ -1
PTR2YKR093W HPC2Q01448 625 aa8.83□□□□□ -1
PTR2YKR093W ATF2P53296 535 aa8.82□□□□□ -1
PTR2YKR093W HAA1Q12753 694 aaKnown RBP8.81□□□□□ -1
PTR2YKR093W MAP2P38174 421 aaKnown RBP8.79□□□□□ -1
PTR2YKR093W TFB3Q03290 321 aa8.78□□□□□ -1
PTR2YKR093W YFR006WP43590 535 aa8.77□□□□□ -1.01
PTR2YKR093W DBP1P24784 617 aaKnown RBP8.76□□□□□ -1.01
PTR2YKR093W UBP10P53874 792 aaPredicted RBP8.76□□□□□ -1.01
PTR2YKR093W PTC3P34221 468 aaKnown RBP8.75□□□□□ -1.01
PTR2YKR093W YDR090CQ03193 310 aa8.71□□□□□ -1.01
PTR2YKR093W YML020WQ03722 664 aa8.7□□□□□ -1.02
PTR2YKR093W PKC1P24583 1151 aa8.69□□□□□ -1.02
PTR2YKR093W SLX5P32828 619 aaKnown RBP8.68□□□□□ -1.02
PTR2YKR093W BRL1P38770 471 aa8.68□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms