RNA–Protein interactions for RNA: YDR185C

UPS3, Transcript of Mitochondrial protein of unknown function, yeastyeast

Gene UPS3, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UPS3YDR185C MTC1P47018 478 aaKnown RBP14.79□□□□□ -0.04
UPS3YDR185C DRS1P32892 752 aaKnown RBP14.72□□□□□ -0.05
UPS3YDR185C BFR2Q06631 534 aaKnown RBP12.69□□□□□ -0.38
UPS3YDR185C DIP2Q12220 943 aaPredicted RBP12.56□□□□□ -0.4
UPS3YDR185C AVT3P36062 692 aa12.43□□□□□ -0.42
UPS3YDR185C FAP1P53971 965 aa12.15□□□□□ -0.46
UPS3YDR185C ISW2Q08773 1120 aa12□□□□□ -0.49
UPS3YDR185C TFA1P36100 482 aa11.97□□□□□ -0.49
UPS3YDR185C PRI1P10363 409 aa11.93□□□□□ -0.5
UPS3YDR185C RSE1Q04693 1361 aaKnown RBP11.88□□□□□ -0.51
UPS3YDR185C RPG1P38249 964 aaKnown RBP11.86□□□□□ -0.51
UPS3YDR185C AAD16Q02895 342 aa11.71□□□□□ -0.53
UPS3YDR185C RPL17AP05740 184 aaKnown RBP11.45□□□□□ -0.58
UPS3YDR185C RPL17BP46990 184 aaKnown RBP11.45□□□□□ -0.58
UPS3YDR185C PRY3P47033 881 aa11.41□□□□□ -0.58
UPS3YDR185C TSR3Q12094 313 aaKnown RBP11.32□□□□□ -0.6
UPS3YDR185C REB1P21538 810 aa11.28□□□□□ -0.6
UPS3YDR185C RQC2Q12532 1038 aaKnown RBP11.21□□□□□ -0.61
UPS3YDR185C SPT21P35209 758 aa11.1□□□□□ -0.63
UPS3YDR185C YCK3P39962 524 aa10.93□□□□□ -0.66
UPS3YDR185C RIM101P33400 625 aa10.89□□□□□ -0.67
UPS3YDR185C MRPL32P25348 183 aa10.82□□□□□ -0.68
UPS3YDR185C HAA1Q12753 694 aaKnown RBP10.76□□□□□ -0.69
UPS3YDR185C YKR023WP36119 530 aaKnown RBP10.73□□□□□ -0.69
UPS3YDR185C OXP1P28273 1286 aa10.56□□□□□ -0.72
UPS3YDR185C CDC27P38042 758 aa10.54□□□□□ -0.72
UPS3YDR185C TFC8Q12308 588 aa10.5□□□□□ -0.73
UPS3YDR185C HOP09932 586 aa10.48□□□□□ -0.73
UPS3YDR185C DCD1P06773 312 aa10.42□□□□□ -0.74
UPS3YDR185C PTP3P40048 928 aa10.4□□□□□ -0.74
UPS3YDR185C SSP1P38871 571 aa10.33□□□□□ -0.76
UPS3YDR185C YAH1Q12184 172 aaKnown RBP10.33□□□□□ -0.76
UPS3YDR185C YIL055CP40523 627 aaKnown RBP10.31□□□□□ -0.76
UPS3YDR185C TAF7Q05021 590 aa10.29□□□□□ -0.76
UPS3YDR185C YLR271WQ06152 274 aa10.24□□□□□ -0.77
UPS3YDR185C DMA1P38823 416 aa10.22□□□□□ -0.77
UPS3YDR185C RSM7P47150 247 aa10.2□□□□□ -0.78
UPS3YDR185C BCH2P36122 765 aa10.19□□□□□ -0.78
UPS3YDR185C ARP8Q12386 881 aaKnown RBP RIP-Chip data10.13□□□□□ -0.79not detected
UPS3YDR185C YGL015CP33199 130 aa10.11□□□□□ -0.79
UPS3YDR185C UBP10P53874 792 aaPredicted RBP10.09□□□□□ -0.79
UPS3YDR185C MAP2P38174 421 aaKnown RBP10.07□□□□□ -0.8
UPS3YDR185C AI2P03876 854 aa10.04□□□□□ -0.8
UPS3YDR185C SCY1P53009 804 aa10.03□□□□□ -0.8
UPS3YDR185C EPS1P40557 701 aa10.01□□□□□ -0.81
UPS3YDR185C PSD2P53037 1138 aaKnown RBP10□□□□□ -0.81
UPS3YDR185C MGA2P40578 1113 aa9.97□□□□□ -0.81
UPS3YDR185C BBC1P47068 1157 aa9.94□□□□□ -0.82
UPS3YDR185C BDF1P35817 686 aa9.93□□□□□ -0.82
UPS3YDR185C CST9Q06032 482 aa9.93□□□□□ -0.82
UPS3YDR185C SLX5P32828 619 aaKnown RBP9.83□□□□□ -0.84
UPS3YDR185C LEO1P38439 464 aa9.78□□□□□ -0.84
UPS3YDR185C MRM1P25270 412 aa9.73□□□□□ -0.85
UPS3YDR185C RCR1P38212 213 aa9.61□□□□□ -0.87
UPS3YDR185C TIF4632P39936 914 aaKnown RBP9.61□□□□□ -0.87
UPS3YDR185C TGL3P40308 642 aa9.58□□□□□ -0.88
UPS3YDR185C RAM2P29703 316 aa9.57□□□□□ -0.88
UPS3YDR185C RTG3P38165 486 aa9.57□□□□□ -0.88
UPS3YDR185C VPS29P38759 282 aa9.53□□□□□ -0.88
UPS3YDR185C NSR1P27476 414 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
UPS3YDR185C LEU3P08638 886 aa9.44□□□□□ -0.9
UPS3YDR185C YMR1P47147 688 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
UPS3YDR185C STS1P38637 319 aa9.41□□□□□ -0.9
UPS3YDR185C MAK11P20484 414 aaKnown RBP9.4□□□□□ -0.9
UPS3YDR185C YAP5P40574 245 aa9.39□□□□□ -0.91
UPS3YDR185C YOR238WQ08634 303 aa9.39□□□□□ -0.91
UPS3YDR185C DBP1P24784 617 aaKnown RBP9.36□□□□□ -0.91
UPS3YDR185C SAS10Q12136 610 aaPredicted RBP9.35□□□□□ -0.91
UPS3YDR185C YFR006WP43590 535 aa9.34□□□□□ -0.91
UPS3YDR185C MST1P07236 462 aa9.33□□□□□ -0.92
UPS3YDR185C PIB1Q06651 286 aa9.3□□□□□ -0.92
UPS3YDR185C SET1P38827 1080 aaKnown RBP9.29□□□□□ -0.92
UPS3YDR185C COQ8P27697 501 aa9.27□□□□□ -0.93
UPS3YDR185C EDS1P38073 919 aa9.24□□□□□ -0.93
UPS3YDR185C VMA1P17255 1071 aaKnown RBP9.21□□□□□ -0.94
UPS3YDR185C MIF2P35201 549 aa9.2□□□□□ -0.94
UPS3YDR185C YPR148CQ06523 435 aa9.2□□□□□ -0.94
UPS3YDR185C NOP53Q12080 455 aaKnown RBP9.16□□□□□ -0.94
UPS3YDR185C PTC3P34221 468 aaKnown RBP9.13□□□□□ -0.95
UPS3YDR185C SAM3Q08986 587 aa9.13□□□□□ -0.95
UPS3YDR185C IFH1P39520 1085 aa9.12□□□□□ -0.95
UPS3YDR185C GTT3P39996 337 aa9.12□□□□□ -0.95
UPS3YDR185C RPN1P38764 993 aaKnown RBP9.09□□□□□ -0.95
UPS3YDR185C VPS70P47161 811 aa9.08□□□□□ -0.96
UPS3YDR185C DMA2P53924 522 aa9.05□□□□□ -0.96
UPS3YDR185C YOL036WQ08206 761 aa9.04□□□□□ -0.96
UPS3YDR185C GRE2Q12068 342 aaKnown RBP9.02□□□□□ -0.97
UPS3YDR185C GYP5Q12344 894 aa9.01□□□□□ -0.97
UPS3YDR185C CKB1P43639 278 aa9□□□□□ -0.97
UPS3YDR185C WSC3Q12215 556 aa9□□□□□ -0.97
UPS3YDR185C YBL029C-AQ3E756 94 aa9□□□□□ -0.97
UPS3YDR185C GUT1P32190 709 aa8.99□□□□□ -0.97
UPS3YDR185C SET4P42948 560 aa8.99□□□□□ -0.97
UPS3YDR185C ATH1P48016 1211 aa8.99□□□□□ -0.97
UPS3YDR185C MSB4Q12317 492 aa8.97□□□□□ -0.97
UPS3YDR185C VNX1P42839 908 aa8.96□□□□□ -0.98
UPS3YDR185C UBP9P39967 754 aa8.95□□□□□ -0.98
UPS3YDR185C ABP1P15891 592 aaKnown RBP8.94□□□□□ -0.98
UPS3YDR185C DCW1P36091 449 aa8.92□□□□□ -0.98
UPS3YDR185C SOL3P38858 249 aa8.92□□□□□ -0.98
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms