Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP24386 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.21■□□□□ 0.99
CHMP24386 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.21■□□□□ 0.99
CHMP24386 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP24386 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP24386 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP24386 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHMP24386 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
CHMP24386 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.2■□□□□ 0.98
CHMP24386 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
CHMP24386 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CHMP24386 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.19■□□□□ 0.98
CHMP24386 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.19■□□□□ 0.98
CHMP24386 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.19■□□□□ 0.98
CHMP24386 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP24386 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CHMP24386 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.19■□□□□ 0.98
CHMP24386 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.19■□□□□ 0.98
CHMP24386 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CHMP24386 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 BX664725.1-201ENST00000438252 379 ntBASIC21.18■□□□□ 0.98
CHMP24386 MIR4281-201ENST00000580852 62 ntBASIC21.18■□□□□ 0.98
CHMP24386 AC137630.3-201ENST00000607245 391 ntBASIC21.18■□□□□ 0.98
CHMP24386 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
CHMP24386 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.18■□□□□ 0.98
CHMP24386 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHMP24386 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.17■□□□□ 0.98
CHMP24386 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
CHMP24386 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.17■□□□□ 0.98
CHMP24386 AC090877.2-201ENST00000558441 1738 ntBASIC21.17■□□□□ 0.98
CHMP24386 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.17■□□□□ 0.98
CHMP24386 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP24386 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP24386 CLDN5-201ENST00000403084 2357 ntBASIC21.16■□□□□ 0.98
CHMP24386 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
CHMP24386 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP24386 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP24386 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHMP24386 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP24386 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP24386 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP24386 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP24386 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP24386 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CHMP24386 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP24386 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
CHMP24386 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.15■□□□□ 0.98
CHMP24386 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP24386 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP24386 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP24386 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP24386 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMP24386 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP24386 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP24386 AC239859.2-201ENST00000444165 318 ntBASIC21.14■□□□□ 0.97
CHMP24386 KRT125P-201ENST00000546827 989 ntBASIC21.14■□□□□ 0.97
CHMP24386 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHMP24386 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMP24386 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP24386 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMP24386 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC21.13■□□□□ 0.97
CHMP24386 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
CHMP24386 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP24386 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms