Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CTSBP07858 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTSBP07858 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
CTSBP07858 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
CTSBP07858 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
CTSBP07858 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSBP07858 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
CTSBP07858 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CTSBP07858 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CTSBP07858 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.73■■□□□ 1.07
CTSBP07858 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
CTSBP07858 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.73■■□□□ 1.07
CTSBP07858 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTSBP07858 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSBP07858 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTSBP07858 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CTSBP07858 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CTSBP07858 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.72■■□□□ 1.07
CTSBP07858 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
CTSBP07858 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSBP07858 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSBP07858 ALDH1A3-203ENST00000557963 1670 ntBASIC21.71■■□□□ 1.07
CTSBP07858 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSBP07858 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSBP07858 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CTSBP07858 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSBP07858 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.7■■□□□ 1.06
CTSBP07858 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSBP07858 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSBP07858 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.7■■□□□ 1.06
CTSBP07858 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.7■■□□□ 1.06
CTSBP07858 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CTSBP07858 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CTSBP07858 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSBP07858 AC004812.2-201ENST00000611079 2094 ntBASIC21.69■■□□□ 1.06
CTSBP07858 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 AC096631.2-201ENST00000436136 790 ntBASIC21.69■■□□□ 1.06
CTSBP07858 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSBP07858 AC110285.6-201ENST00000617652 491 ntBASIC21.69■■□□□ 1.06
CTSBP07858 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.69■■□□□ 1.06
CTSBP07858 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.69■■□□□ 1.06
CTSBP07858 AL161729.1-201ENST00000604104 1402 ntBASIC21.69■■□□□ 1.06
CTSBP07858 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 AC009102.2-201ENST00000606772 1639 ntBASIC21.69■■□□□ 1.06
CTSBP07858 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CTSBP07858 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.68■■□□□ 1.06
CTSBP07858 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSBP07858 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSBP07858 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSBP07858 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CTSBP07858 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CTSBP07858 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CTSBP07858 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.67■■□□□ 1.06
CTSBP07858 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CTSBP07858 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC21.67■■□□□ 1.06
CTSBP07858 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CTSBP07858 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CTSBP07858 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSBP07858 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.66■■□□□ 1.06
CTSBP07858 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CTSBP07858 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CTSBP07858 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.66■■□□□ 1.06
CTSBP07858 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.66■■□□□ 1.06
CTSBP07858 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CTSBP07858 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSBP07858 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSBP07858 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSBP07858 LINC00543-201ENST00000567234 1845 ntBASIC21.65■■□□□ 1.06
CTSBP07858 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CTSBP07858 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC21.65■■□□□ 1.06
CTSBP07858 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CTSBP07858 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
CTSBP07858 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSBP07858 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
CTSBP07858 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.64■■□□□ 1.05
CTSBP07858 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSBP07858 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSBP07858 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSBP07858 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CTSBP07858 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.64■■□□□ 1.05
CTSBP07858 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CTSBP07858 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
CTSBP07858 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.63■■□□□ 1.05
CTSBP07858 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.63■■□□□ 1.05
CTSBP07858 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.63■■□□□ 1.05
CTSBP07858 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC21.63■■□□□ 1.05
CTSBP07858 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
CTSBP07858 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CTSBP07858 AL139246.5-201ENST00000606645 996 ntBASIC21.63■■□□□ 1.05
CTSBP07858 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms