Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2ABP04908 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HIST1H2ABP04908 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.67■□□□□ 0.9
HIST1H2ABP04908 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HIST1H2ABP04908 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HIST1H2ABP04908 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.64■□□□□ 0.9
HIST1H2ABP04908 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.64■□□□□ 0.9
HIST1H2ABP04908 YBX1P4-201ENST00000392794 808 ntBASIC20.64■□□□□ 0.89
HIST1H2ABP04908 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HIST1H2ABP04908 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 MIR4508-201ENST00000584178 70 ntBASIC20.63■□□□□ 0.89
HIST1H2ABP04908 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
HIST1H2ABP04908 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HIST1H2ABP04908 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 MIR4281-201ENST00000580852 62 ntBASIC20.61■□□□□ 0.89
HIST1H2ABP04908 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
HIST1H2ABP04908 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 AC131274.2-201ENST00000580697 1507 ntBASIC20.6■□□□□ 0.89
HIST1H2ABP04908 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
HIST1H2ABP04908 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2ABP04908 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2ABP04908 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2ABP04908 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2ABP04908 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
HIST1H2ABP04908 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms