Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM4BO94953 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
KDM4BO94953 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
KDM4BO94953 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM4BO94953 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
KDM4BO94953 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.87■□□□□ 0.77
KDM4BO94953 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM4BO94953 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM4BO94953 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
KDM4BO94953 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM4BO94953 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
KDM4BO94953 AL592293.1-201ENST00000502889 1188 ntBASIC19.86■□□□□ 0.77
KDM4BO94953 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.86■□□□□ 0.77
KDM4BO94953 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KDM4BO94953 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM4BO94953 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
KDM4BO94953 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
KDM4BO94953 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDM4BO94953 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
KDM4BO94953 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.85■□□□□ 0.77
KDM4BO94953 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDM4BO94953 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
KDM4BO94953 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.84■□□□□ 0.77
KDM4BO94953 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.84■□□□□ 0.77
KDM4BO94953 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 RPS2P7-201ENST00000447334 885 ntBASIC19.84■□□□□ 0.77
KDM4BO94953 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 AC018755.3-202ENST00000596210 929 ntBASIC19.84■□□□□ 0.77
KDM4BO94953 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
KDM4BO94953 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC19.84■□□□□ 0.77
KDM4BO94953 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
KDM4BO94953 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
KDM4BO94953 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.84■□□□□ 0.77
KDM4BO94953 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
KDM4BO94953 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
KDM4BO94953 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.83■□□□□ 0.77
KDM4BO94953 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
KDM4BO94953 RARRES2P2-201ENST00000394842 485 ntBASIC19.83■□□□□ 0.77
KDM4BO94953 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.83■□□□□ 0.77
KDM4BO94953 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDM4BO94953 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.83■□□□□ 0.76
KDM4BO94953 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDM4BO94953 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.83■□□□□ 0.76
KDM4BO94953 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDM4BO94953 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
KDM4BO94953 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDM4BO94953 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
KDM4BO94953 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDM4BO94953 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KDM4BO94953 SPCS2P3-201ENST00000500401 656 ntBASIC19.82■□□□□ 0.76
KDM4BO94953 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
KDM4BO94953 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
KDM4BO94953 AL117328.2-201ENST00000624617 1940 ntBASIC19.82■□□□□ 0.76
KDM4BO94953 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
KDM4BO94953 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
KDM4BO94953 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.82■□□□□ 0.76
KDM4BO94953 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.82■□□□□ 0.76
KDM4BO94953 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.81■□□□□ 0.76
KDM4BO94953 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KDM4BO94953 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC19.81■□□□□ 0.76
KDM4BO94953 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM4BO94953 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
KDM4BO94953 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM4BO94953 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
KDM4BO94953 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC19.8■□□□□ 0.76
KDM4BO94953 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.8■□□□□ 0.76
KDM4BO94953 HSD17B1P1-201ENST00000590052 955 ntBASIC19.8■□□□□ 0.76
KDM4BO94953 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
KDM4BO94953 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC19.79■□□□□ 0.76
KDM4BO94953 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
KDM4BO94953 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.79■□□□□ 0.76
KDM4BO94953 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
KDM4BO94953 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
KDM4BO94953 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
KDM4BO94953 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.78■□□□□ 0.76
KDM4BO94953 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.78■□□□□ 0.76
KDM4BO94953 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KDM4BO94953 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
KDM4BO94953 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.78■□□□□ 0.76
KDM4BO94953 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms