Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCN1O60741 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
HCN1O60741 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.18■□□□□ 0.98
HCN1O60741 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
HCN1O60741 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.18■□□□□ 0.98
HCN1O60741 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.18■□□□□ 0.98
HCN1O60741 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.18■□□□□ 0.98
HCN1O60741 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HCN1O60741 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.17■□□□□ 0.98
HCN1O60741 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC21.17■□□□□ 0.98
HCN1O60741 TSPY9P-201ENST00000440215 945 ntBASIC21.17■□□□□ 0.98
HCN1O60741 TSPY11P-201ENST00000442607 1045 ntBASIC21.17■□□□□ 0.98
HCN1O60741 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.17■□□□□ 0.98
HCN1O60741 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.17■□□□□ 0.98
HCN1O60741 AC090877.2-201ENST00000558441 1738 ntBASIC21.17■□□□□ 0.98
HCN1O60741 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.17■□□□□ 0.98
HCN1O60741 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCN1O60741 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCN1O60741 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
HCN1O60741 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
HCN1O60741 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
HCN1O60741 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.16■□□□□ 0.98
HCN1O60741 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCN1O60741 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCN1O60741 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.16■□□□□ 0.98
HCN1O60741 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
HCN1O60741 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.16■□□□□ 0.98
HCN1O60741 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
HCN1O60741 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCN1O60741 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCN1O60741 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HCN1O60741 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.15■□□□□ 0.98
HCN1O60741 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
HCN1O60741 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
HCN1O60741 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
HCN1O60741 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HCN1O60741 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
HCN1O60741 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
HCN1O60741 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.14■□□□□ 0.97
HCN1O60741 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.14■□□□□ 0.97
HCN1O60741 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCN1O60741 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HCN1O60741 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.14■□□□□ 0.97
HCN1O60741 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCN1O60741 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.14■□□□□ 0.97
HCN1O60741 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HCN1O60741 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCN1O60741 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HCN1O60741 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.13■□□□□ 0.97
HCN1O60741 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
HCN1O60741 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC21.13■□□□□ 0.97
HCN1O60741 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCN1O60741 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HCN1O60741 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.13■□□□□ 0.97
HCN1O60741 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HCN1O60741 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HCN1O60741 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC21.12■□□□□ 0.97
HCN1O60741 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCN1O60741 AF131216.4-201ENST00000638924 1588 ntBASIC21.12■□□□□ 0.97
HCN1O60741 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HCN1O60741 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HCN1O60741 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.12■□□□□ 0.97
HCN1O60741 HLA-L-211ENST00000482052 1765 ntBASIC21.12■□□□□ 0.97
HCN1O60741 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.12■□□□□ 0.97
HCN1O60741 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HCN1O60741 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 AC004812.2-201ENST00000611079 2094 ntBASIC21.11■□□□□ 0.97
HCN1O60741 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.11■□□□□ 0.97
HCN1O60741 AC010997.5-201ENST00000609182 354 ntBASIC21.11■□□□□ 0.97
HCN1O60741 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.11■□□□□ 0.97
HCN1O60741 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.11■□□□□ 0.97
HCN1O60741 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HCN1O60741 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HCN1O60741 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.1■□□□□ 0.97
HCN1O60741 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.1■□□□□ 0.97
HCN1O60741 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.1■□□□□ 0.97
HCN1O60741 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.1■□□□□ 0.97
HCN1O60741 MTDHP2-201ENST00000601468 714 ntBASIC21.1■□□□□ 0.97
HCN1O60741 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HCN1O60741 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HCN1O60741 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
HCN1O60741 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.09■□□□□ 0.97
HCN1O60741 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
HCN1O60741 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
HCN1O60741 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.09■□□□□ 0.97
HCN1O60741 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms