Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 LINC01124-201ENST00000409786 2117 ntBASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TRBV11-1A0A0K0K1C0 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
TRBV11-1A0A0K0K1C0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV11-1A0A0K0K1C0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.14■□□□□ 0.97
TRBV11-1A0A0K0K1C0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV11-1A0A0K0K1C0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV11-1A0A0K0K1C0 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TRBV11-1A0A0K0K1C0 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 MTURN-203ENST00000409688 843 ntTSL 2 BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AL139125.2-201ENST00000623134 1869 ntBASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRBV11-1A0A0K0K1C0 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TRBV11-1A0A0K0K1C0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
TRBV11-1A0A0K0K1C0 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AC141586.4-201ENST00000624558 1573 ntBASIC21.1■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.09■□□□□ 0.97
TRBV11-1A0A0K0K1C0 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 LINC00543-201ENST00000567234 1845 ntBASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SRD5A1P1-201ENST00000442297 786 ntBASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TRBV11-1A0A0K0K1C0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV11-1A0A0K0K1C0 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TRBV11-1A0A0K0K1C0 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.07■□□□□ 0.96
TRBV11-1A0A0K0K1C0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC21.06■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
TRBV11-1A0A0K0K1C0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 AC009102.2-201ENST00000606772 1639 ntBASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
TRBV11-1A0A0K0K1C0 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms