Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TRAV8-4A0A0B4J246 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 HYI-210ENST00000486909 905 ntTSL 5 BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 AC141586.4-201ENST00000624558 1573 ntBASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TRAV8-4A0A0B4J246 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 AC087393.1-201ENST00000582896 145 ntBASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TRAV8-4A0A0B4J246 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 LSR-205ENST00000427250 1606 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 ABHD17AP5-201ENST00000580133 923 ntBASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 MED17-221ENST00000639724 2317 ntTSL 5 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TRAV8-4A0A0B4J246 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 AL592295.1-201ENST00000400984 884 ntBASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 BRD4-212ENST00000630599 726 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV8-4A0A0B4J246 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 SLC25A24-204ENST00000569674 2357 ntBASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 DUX4L9-201ENST00000449051 1259 ntBASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 U85056.1-201ENST00000616429 682 ntBASIC15.77■□□□□ 0.12
TRAV8-4A0A0B4J246 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-4A0A0B4J246 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-4A0A0B4J246 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-4A0A0B4J246 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV8-4A0A0B4J246 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
TRAV8-4A0A0B4J246 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV8-4A0A0B4J246 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 SPCS2P3-201ENST00000500401 656 ntBASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.75■□□□□ 0.11
TRAV8-4A0A0B4J246 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms